RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 ERVK11-1P61568 191 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 HNF4GQ14541 408 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 LCN1P1Q5VSP4 162 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 KRT74Q7RTS7 529 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 SLC35E3Q7Z769 313 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 RTN4RL2Q86UN3 420 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 EGFL6Q8IUX8 553 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 OR52N4Q8NGI2 321 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 OR8U1Q8NH10 309 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 EMG1Q92979 244 aaKnown RBP9.6□□□□□ -0.87
PRPF8-208ENST00000573716 ZMAT4Q9H898 229 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 ZNF286AQ9HBT8 521 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 SCOCQ9UIL1 159 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 MAGEL2Q9UJ55 1249 aa9.6□□□□□ -0.87
PRPF8-208ENST00000573716 ACOD1A6NK06 481 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 BUB1B-PAK6H3BSN5 160 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 ARPC2O15144 300 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 CALCBP10092 127 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 TMEM11P17152 192 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 MFGE8Q08431 387 aaPredicted RBP9.59□□□□□ -0.87
PRPF8-208ENST00000573716 IL24Q13007 206 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 KPNB1Q14974 876 aaKnown RBP9.59□□□□□ -0.87
PRPF8-208ENST00000573716 ZNF829Q3KNS6 432 aaPredicted RBP9.59□□□□□ -0.87
PRPF8-208ENST00000573716 CCDC144NLQ6NUI1 221 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 FOXRED2Q8IWF2 684 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 COMMD1Q8N668 190 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 OR56B4Q8NH76 319 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 CREB3L1Q96BA8 519 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 CADM1Q9BY67 442 aaKnown RBP9.59□□□□□ -0.87
PRPF8-208ENST00000573716 MROQ9BYG7 248 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 PKIBQ9C010 78 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 GAL3ST2Q9H3Q3 398 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 DCLRE1BQ9H816 532 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 ING3Q9NXR8 418 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 IL36RNQ9UBH0 155 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 IKZF2Q9UKS7 526 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 UBE2J1Q9Y385 318 aaPredicted RBP9.59□□□□□ -0.87
PRPF8-208ENST00000573716 U3KQV3 271 aa9.59□□□□□ -0.87
PRPF8-208ENST00000573716 SORL1Q92673 2214 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 TRGV10A0A0A0MS01 117 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 H3BSH0 61 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 SIRPB1O00241 398 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 DLGAP1O14490 977 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 CCDC22O60826 627 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 IGLV1-47P01700 117 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 MRPL3P09001 348 aaKnown RBP9.58□□□□□ -0.88
PRPF8-208ENST00000573716 ALOX5APP20292 161 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 GDNFP39905 211 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 HMGA2P52926 109 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 PRRX1P54821 245 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 P2RX3P56373 397 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 HLA-DRB5Q30154 266 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 CXorf66Q5JRM2 361 aaPredicted RBP9.58□□□□□ -0.88
PRPF8-208ENST00000573716 TEX38Q6PEX7 206 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 SLC25A26Q70HW3 274 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 STPG2Q8N412 459 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 C5orf56Q8N8D9 126 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 BBS1Q8NFJ9 593 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 TOMM40LQ969M1 308 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 ITFG2Q969R8 447 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 RPEQ96AT9 228 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 MTCH1Q9NZJ7 389 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 NUFIP1Q9UHK0 495 aaKnown RBP9.58□□□□□ -0.88
PRPF8-208ENST00000573716 GLS2Q9UI32 602 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 SLC7A11Q9UPY5 501 aa9.58□□□□□ -0.88
PRPF8-208ENST00000573716 LOC110117498-PIK3R3F6TDL0 507 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 MGST3O14880 152 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 PSPNO60542 156 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 TTRP02766 147 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 FRMD6-AS1P0C7T7 363 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 NFYBP25208 207 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 RIDAP52758 137 aaKnown RBP9.57□□□□□ -0.88
PRPF8-208ENST00000573716 BCL2L15Q5TBC7 163 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 TMEM42Q69YG0 159 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 HEPN1Q6WQI6 88 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 CPOQ8IVL8 374 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 DRAM1Q8N682 238 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 OR4D6Q8NGJ1 314 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 CITED4Q96RK1 184 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 DGCR6LQ9BY27 220 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 DNAJB9Q9UBS3 223 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 SAMHD1Q9Y3Z3 626 aaKnown RBP9.57□□□□□ -0.88
PRPF8-208ENST00000573716 LYSTQ99698 3801 aa9.57□□□□□ -0.88
PRPF8-208ENST00000573716 SACSQ9NZJ4 4579 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 LINC01548A6NM66 108 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 OOSP1A8MZH6 123 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 LY6LH3BQJ8 138 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 PRODHO43272 600 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 IGLV3-1P01715 115 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 IGHV3-7P01780 117 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 PRKACAP17612 351 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 OR3A1P47881 315 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 KIR2DS1Q14954 304 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 MICAQ29983 383 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 ODF4Q2M2E3 257 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 FAM27D1Q5T7N8 215 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 ENTHD1Q8IYW4 607 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 ISOC1Q96CN7 298 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 CMTM5Q96DZ9 223 aa9.56□□□□□ -0.88
PRPF8-208ENST00000573716 RNFT2Q96EX2 444 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms