RNA–Protein interactions for RNA: ENST00000568561.5

NME3-211, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 1 (best)

Gene NME3, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-211ENST00000568561 PSPNO60542 156 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 DNAJC8O75937 253 aaPredicted RBP12.42□□□□□ -0.42
NME3-211ENST00000568561 HAND1O96004 215 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 PF4P02776 101 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 EPHA2P29317 976 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 MEF2CQ06413 473 aaPredicted RBP12.42□□□□□ -0.42
NME3-211ENST00000568561 FLOT2Q14254 428 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 MINOS1Q5TGZ0 78 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 PRAMEF5Q5TYX0 476 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 AADACL4Q5VUY2 407 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 FAHD1Q6P587 224 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 Q6ZSR3 168 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 EGFL6Q8IUX8 553 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 YIPF7Q8N8F6 280 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 WFDC9Q8NEX5 89 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 OR4P4Q8NGL7 312 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 SNX22Q96L94 193 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 IL4I1Q96RQ9 567 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 RBFOX1Q9NWB1 397 aaKnown RBP12.42□□□□□ -0.42
NME3-211ENST00000568561 CLN6Q9NWW5 311 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 LINC00312Q9Y6C7 94 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 MINOS1-NBL1R4GNA1 71 aa12.42□□□□□ -0.42
NME3-211ENST00000568561 FAM90A22PA8MWA6 464 aa12.41□□□□□ -0.42
NME3-211ENST00000568561 SYT7O43581 403 aa12.41□□□□□ -0.42
NME3-211ENST00000568561 RRP9O43818 475 aaKnown RBP12.41□□□□□ -0.42
NME3-211ENST00000568561 NPBWR2P48146 333 aa12.41□□□□□ -0.42
NME3-211ENST00000568561 POU3F4P49335 361 aa12.41□□□□□ -0.42
NME3-211ENST00000568561 ACTR3P61158 418 aa12.41□□□□□ -0.42
NME3-211ENST00000568561 KHDC1LQ5JSQ8 128 aa12.41□□□□□ -0.42
NME3-211ENST00000568561 TRAPPC6BQ86SZ2 158 aa12.41□□□□□ -0.42
NME3-211ENST00000568561 CATSPERDQ86XM0 798 aa12.41□□□□□ -0.42
NME3-211ENST00000568561 MYDGFQ969H8 173 aa12.41□□□□□ -0.42
NME3-211ENST00000568561 WI2-2373I1.2A0A1W2PRP0 233 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 TCRBV4S1A1TA0A5B7 111 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 SIRPB1O00241 398 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 KRT8P05787 483 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 LPLP06858 475 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 BCL3P20749 454 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 AZGP1P25311 298 aaKnown RBP12.4□□□□□ -0.42
NME3-211ENST00000568561 HTR1DP28221 377 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 PEX2P28328 305 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 KRTAP10-11P60412 298 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 ZNF91Q05481 1191 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 ABCA11PQ4W5N1 156 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 VAX1Q5SQQ9 334 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 SLX4IPQ5VYV7 408 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 NXNL2Q5VZ03 156 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 CENPVQ7Z7K6 275 aaPredicted RBP12.4□□□□□ -0.42
NME3-211ENST00000568561 TMEM163Q8TC26 289 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 DNAJC9Q8WXX5 260 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 BORCS8Q96FH0 119 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 MNTQ99583 582 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 PRRG3Q9BZD7 231 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 CHST5Q9GZS9 411 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 KRT84Q9NSB2 600 aa12.4□□□□□ -0.42
NME3-211ENST00000568561 H2AFY2Q9P0M6 372 aaPredicted RBP12.4□□□□□ -0.42
NME3-211ENST00000568561 LOC107986453A0A1B0GWG9 222 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 A0A1W2PQL4 384 aaPredicted RBP12.39□□□□□ -0.43
NME3-211ENST00000568561 TCRBV3S1A0A5B6 114 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 GATBO75879 557 aaKnown RBP12.39□□□□□ -0.43
NME3-211ENST00000568561 PRKACAP17612 351 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 HOXD3P31249 432 aaPredicted RBP12.39□□□□□ -0.43
NME3-211ENST00000568561 GDNFP39905 211 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 OR3A1P47881 315 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 FUT6P51993 359 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 SLC35A2P78381 396 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 C12orf73Q69YU5 71 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 RDH10Q8IZV5 341 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 PRSS35Q8N3Z0 413 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 SLC25A33Q9BSK2 321 aa12.39□□□□□ -0.43
NME3-211ENST00000568561 ZAR1LA6NP61 321 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 ENTPD6O75354 484 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 CDK2P24941 298 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 KIR3DL2P43630 455 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 P2RX3P56373 397 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 EFNB1P98172 346 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 IL18R1Q13478 541 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 DEFB121Q5J5C9 76 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 C9orf152Q5JTZ5 239 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 UTF1Q5T230 341 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 FAM58AQ8N1B3 248 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 ABHD12Q8N2K0 398 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 OR10H4Q8NGA5 316 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 CAPSLQ8WWF8 208 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 RFT1Q96AA3 541 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 NRBF2Q96F24 287 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 LIN7BQ9HAP6 207 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 INPP5EQ9NRR6 644 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 ING3Q9NXR8 418 aa12.38□□□□□ -0.43
NME3-211ENST00000568561 TSSC4Q9Y5U2 329 aaPredicted RBP12.38□□□□□ -0.43
NME3-211ENST00000568561 IGKV1-9A0A0C4DH69 117 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 TRBV2A0A0J9YWF9 115 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 METTL15A6NJ78 407 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 MGST3O14880 152 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 AMY1AP04745 511 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 AMY2AP04746 511 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 HOXB6P17509 224 aaKnown RBP12.37□□□□□ -0.43
NME3-211ENST00000568561 ZBTB49Q6ZSB9 765 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 RNF144BQ7Z419 303 aa12.37□□□□□ -0.43
NME3-211ENST00000568561 GID4Q8IVV7 300 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms