RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 RNF144BQ7Z419 303 aa13.35□□□□□ -0.27
CCND1-205ENST00000542367 OR8H2Q8N162 312 aa13.35□□□□□ -0.27
CCND1-205ENST00000542367 FAM58AQ8N1B3 248 aa13.35□□□□□ -0.27
CCND1-205ENST00000542367 OR52I1Q8NGK6 324 aa13.35□□□□□ -0.27
CCND1-205ENST00000542367 CITED1Q99966 193 aa13.35□□□□□ -0.27
CCND1-205ENST00000542367 C16orf95Q9H693 158 aa13.35□□□□□ -0.27
CCND1-205ENST00000542367 SEBOXQ9HB31 216 aaPredicted RBP13.35□□□□□ -0.27
CCND1-205ENST00000542367 MRPS18AQ9NVS2 196 aaKnown RBP13.35□□□□□ -0.27
CCND1-205ENST00000542367 ERVK13-1Q9NX77 482 aa13.35□□□□□ -0.27
CCND1-205ENST00000542367 RPL36Q9Y3U8 105 aaKnown RBP13.35□□□□□ -0.27
CCND1-205ENST00000542367 TRBV2A0A0J9YWF9 115 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 E9PI62 339 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 TSPAN9O75954 239 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 ZNF728P0DKX0 622 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 PRKACAP17612 351 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 SNU13P55769 128 aaKnown RBP13.34□□□□□ -0.27
CCND1-205ENST00000542367 PROK1P58294 105 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 EDDM3AQ14507 147 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 LY6EQ16553 131 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 TREML4Q6UXN2 200 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 OR52N4Q8NGI2 321 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 OR13C9Q8NGT0 318 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 APH1BQ8WW43 257 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 SPACA5Q96QH8 159 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 CHST6Q9GZX3 395 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 PPA2Q9H2U2 334 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 INPP5EQ9NRR6 644 aa13.34□□□□□ -0.27
CCND1-205ENST00000542367 IGKV1-12A0A0C4DH73 117 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 PSPNO60542 156 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 CLPXO76031 633 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 ZFPL1O95159 310 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 IGKV1D-12P01611 117 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 MT-ND2P03891 347 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 GABRR1P24046 479 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 PEX2P28328 305 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 GBX2P52951 348 aaPredicted RBP13.33□□□□□ -0.28
CCND1-205ENST00000542367 MEF2CQ06413 473 aaPredicted RBP13.33□□□□□ -0.28
CCND1-205ENST00000542367 ZNF146Q15072 292 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 GRK1Q15835 563 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 LRRC75BQ2VPJ9 315 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 KLHL22Q53GT1 634 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 SLC35E4Q6ICL7 350 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 TPRX1Q8N7U7 411 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 ZNF555Q8NEP9 628 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 OR5AK2Q8NH90 309 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 ZNF714Q96N38 554 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 ZCCHC4Q9H5U6 513 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 HMG20AQ9NP66 347 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 SMPD3Q9NY59 655 aaPredicted RBP13.33□□□□□ -0.28
CCND1-205ENST00000542367 GLS2Q9UI32 602 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 DSCAML1Q8TD84 2053 aa13.33□□□□□ -0.28
CCND1-205ENST00000542367 hADV38S2A0JD32 116 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 TMEM212A6NML5 194 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 WBP4O75554 376 aaKnown RBP13.32□□□□□ -0.28
CCND1-205ENST00000542367 RBP4P02753 201 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 MRPL28Q13084 256 aaKnown RBP13.32□□□□□ -0.28
CCND1-205ENST00000542367 SMN1Q16637 294 aaKnown RBP13.32□□□□□ -0.28
CCND1-205ENST00000542367 ZSCAN26Q16670 478 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 SPIN3Q5JUX0 258 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 TCF23Q7RTU1 214 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 LHFPL4Q7Z7J7 247 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 SERPINA12Q8IW75 414 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 OR4S1Q8NGB4 309 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 OR5D18Q8NGL1 313 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 OR5D14Q8NGL3 314 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 OR13D1Q8NGV5 346 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 STMN2Q93045 179 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 RDH12Q96NR8 316 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 PDCD1LG2Q9BQ51 273 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 COMMD4Q9H0A8 199 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 GSTK1Q9Y2Q3 226 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 MGAM2Q2M2H8 2515 aa13.32□□□□□ -0.28
CCND1-205ENST00000542367 FAM90A8PA6NJQ4 464 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 SIRPB1O00241 398 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 SH2D1BO14796 132 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 MGST3O14880 152 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 KDM4BO94953 1096 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 ARG1P05089 322 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 RPSAP08865 295 aaKnown RBP13.31□□□□□ -0.28
CCND1-205ENST00000542367 CCDC159P0C7I6 412 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 IGHV1-8P0DP01 117 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 GTF2A1P52655 376 aaPredicted RBP13.31□□□□□ -0.28
CCND1-205ENST00000542367 AANATQ16613 207 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 LPCAT4Q643R3 524 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 CRIP3Q6Q6R5 217 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 PARP16Q8N5Y8 322 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 PPP1R35Q8TAP8 253 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 NEK6Q9HC98 313 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 FGF20Q9NP95 211 aaPredicted RBP13.31□□□□□ -0.28
CCND1-205ENST00000542367 DHDHQ9UQ10 334 aa13.31□□□□□ -0.28
CCND1-205ENST00000542367 PKD1L1Q8TDX9 2849 aa13.3□□□□□ -0.28
CCND1-205ENST00000542367 ALX3O95076 343 aa13.3□□□□□ -0.28
CCND1-205ENST00000542367 CLIC3O95833 236 aa13.3□□□□□ -0.28
CCND1-205ENST00000542367 OR2H2O95918 312 aa13.3□□□□□ -0.28
CCND1-205ENST00000542367 HCKP08631 526 aa13.3□□□□□ -0.28
CCND1-205ENST00000542367 LIMS3P0CW19 117 aa13.3□□□□□ -0.28
CCND1-205ENST00000542367 LIMS4P0CW20 117 aa13.3□□□□□ -0.28
CCND1-205ENST00000542367 OR3A1P47881 315 aa13.3□□□□□ -0.28
CCND1-205ENST00000542367 KISS1Q15726 138 aa13.3□□□□□ -0.28
CCND1-205ENST00000542367 LRRC36Q1X8D7 754 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms