RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 CEACAM5P06731 702 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 STAG3L3P0CL85 134 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 RAG2P55895 527 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 MICBQ29980 383 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 FAM78BQ5VT40 261 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 LURAP1LQ8IV03 231 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 OR5AU1Q8NGC0 362 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 OR5M9Q8NGP3 310 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 SPAG8Q99932 426 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-208ENST00000538570 Q9N2K0 584 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 NAGKQ9UJ70 344 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 ERRFI1Q9UJM3 462 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-208ENST00000538570 OR4C45A6NMZ5 311 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 ALG1L2C9J202 215 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 PPP1CAP62136 330 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 PPP1R1AQ13522 171 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 TEX30Q5JUR7 227 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 RSPO2Q6UXX9 243 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-208ENST00000538570 SPNS3Q6ZMD2 512 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 ADAMTS17Q8TE56 1095 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 R3HDMLQ9H3Y0 253 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 CDRT15L2A8MXV6 281 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 PLPP2O43688 288 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 SEMA7AO75326 666 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 SP1P08047 785 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 FGF9P31371 208 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-208ENST00000538570 GPR3P46089 330 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 SELENOPP49908 381 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 HLA-BQ31612 363 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 NSUN5P2Q63ZY6 315 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 TP53I13Q8NBR0 393 aaPredicted RBP8.87□□□□□ -0.99
COL4A6-208ENST00000538570 ATP5SQ99766 215 aa8.87□□□□□ -0.99
COL4A6-208ENST00000538570 A0A0B4J2E0 115 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 A0A1B0GX12 115 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 TIAL1Q01085 375 aaKnown RBP eCLIP8.86□□□□□ -0.99
COL4A6-208ENST00000538570 DHRS2Q13268 280 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 FNDC7Q5VTL7 733 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 RPEQ96AT9 228 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 TMPRSS13Q9BYE2 586 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 NAA60Q9H7X0 242 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 MTFP1Q9UDX5 166 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.86□□□□□ -0.99
COL4A6-208ENST00000538570 DHRS3O75911 302 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 EPPINO95925 133 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 SPATA45Q537H7 98 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 LYG1Q8N1E2 194 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 GPX7Q96SL4 187 aaPredicted RBP8.86□□□□□ -0.99
COL4A6-208ENST00000538570 TRGV5A0A0B4J1U4 118 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 MED19A0JLT2 244 aaPredicted RBP8.86□□□□□ -0.99
COL4A6-208ENST00000538570 FXYD1O00168 92 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 TSPAN13O95857 204 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 FAM87AP0C7U9 286 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 PDCD1Q15116 288 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 Q7L0L9 218 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 OR2M3Q8NG83 312 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 PLPPR2Q96GM1 343 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 GRAMD2BQ96HH9 432 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 SEBOXQ9HB31 216 aaPredicted RBP8.86□□□□□ -0.99
COL4A6-208ENST00000538570 CLEC5AQ9NY25 188 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 PSG11Q9UQ72 335 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 SIGLEC7Q9Y286 467 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 OR2T8A6NH00 312 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 SULT1A1P50225 295 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 SCAND1P57086 179 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 GFRALQ6UXV0 394 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 LINC01465Q8N7H1 131 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 ANAPC13Q9BS18 74 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 ZNF426Q9BUY5 554 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 FAM117AQ9C073 453 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 C20orf141Q9NUB4 165 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 C7orf77A4D0Y5 90 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 DEFB108AA8MXU0 73 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 MS4A18H0YCH9 400 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 PTHLHP12272 177 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 CRISP2P16562 243 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 ZNF273Q14593 569 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 MS4A18Q3C1V0 323 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 ZNF260Q3ZCT1 412 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 VASH2Q86V25 355 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 SLC26A10Q8NG04 563 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 OR11G2Q8NGC1 345 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 PIK3IP1Q96FE7 263 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 IL21Q9HBE4 155 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 MMP25Q9NPA2 562 aa8.86□□□□□ -0.99
COL4A6-208ENST00000538570 LILRA5A6NI73 299 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 SBK3P0C264 359 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 CRYBB2P43320 205 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 PGFP49763 221 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 CCL7P80098 99 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 RELQ04864 619 aaPredicted RBP8.85□□□□□ -0.99
COL4A6-208ENST00000538570 RNPS1Q15287 305 aaKnown RBP8.85□□□□□ -0.99
COL4A6-208ENST00000538570 TMEM215Q68D42 235 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 OR10G4Q8NGN3 311 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 OR10G9Q8NGN4 311 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 OR10G7Q8NGN6 311 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 OR4C3Q8NH37 302 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 NUBPLQ8TB37 319 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 TMEM191AQ9H0A3 160 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 CLEC1BQ9P126 229 aa8.85□□□□□ -0.99
COL4A6-208ENST00000538570 A0A1B0GW15 77 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms