RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 OR4F17Q8NGA8 305 aa15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 WIPF2Q8TF74 440 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 C10orf35Q96D05 121 aa15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 R3HDM4Q96D70 268 aa15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 CENPNQ96H22 339 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 OR4F4Q96R69 305 aa15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 MMP28Q9H239 520 aa15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 SEBOXQ9HB31 216 aaPredicted RBP15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 HILPDAQ9Y5L2 63 aa15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 SESN1Q9Y6P5 492 aa15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 MINOS1-NBL1R4GNA1 71 aa15.84■□□□□ 0.13
TNFRSF1B-204ENST00000536782 H3BUI4 141 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 APOL3O95236 402 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 IGHA1P01876 353 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 GABRR1P24046 479 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ATP1B3P54709 279 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 SLC34A1Q06495 639 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 GRK1Q15835 563 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OXLD1Q5BKU9 147 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 Q6ZPA2 131 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 AMIGO2Q86SJ2 522 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 TPRX1Q8N7U7 411 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OR52N4Q8NGI2 321 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 NDNFQ8TB73 568 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 PP6455Q8WZ26 134 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OR5M11Q96RB7 305 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 CITED2Q99967 270 aaPredicted RBP15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OSBPL10Q9BXB5 764 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 WNT10AQ9GZT5 417 aa15.83■□□□□ 0.12
TNFRSF1B-204ENST00000536782 IGHV2-26A0A0B4J1V2 119 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 LOC107986453A0A1B0GWG9 222 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 CYB5AP00167 134 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ALDOBP05062 364 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 UBCP0CG48 685 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 JUNBP17275 347 aaPredicted RBP15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 RBP2P50120 134 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 BLCAPP62952 87 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ZNF91Q05481 1191 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ZFP1Q6P2D0 407 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ZBTB49Q6ZSB9 765 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 FAM220AQ7Z4H9 259 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 C10orf67Q8IYJ2 551 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 PRSS35Q8N3Z0 413 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 DNAAF1Q8NEP3 725 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 CIB1Q99828 191 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 CLEC7AQ9BXN2 247 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 CHST6Q9GZX3 395 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 TMEM133Q9H2Q1 129 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 RBFOX1Q9NWB1 397 aaKnown RBP15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 IL36RNQ9UBH0 155 aa15.82■□□□□ 0.12
TNFRSF1B-204ENST00000536782 PIN1P1O15428 100 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 PSPNO60542 156 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 AZGP1P25311 298 aaKnown RBP15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 VDAC2P45880 294 aaPredicted RBP15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 POU3F4P49335 361 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 TMED1Q13445 227 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 Q6ZS46 218 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 RDH10Q8IZV5 341 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 FAM58AQ8N1B3 248 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OR8J1Q8NGP2 316 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 PYDC1Q8WXC3 89 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 GLS2Q9UI32 602 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 GNG8Q9UK08 70 aa15.81■□□□□ 0.12
TNFRSF1B-204ENST00000536782 TRBV2A0A0J9YWF9 115 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ADARB2-AS1A8MUL3 147 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 MGST3O14880 152 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 BCL3P20749 454 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 HTR1DP28221 377 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 DUSP1P28562 367 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 POLR2IP36954 125 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 KIR3DL2P43630 455 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 NPBWR2P48146 333 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 MTCP1P56278 107 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 IL18R1Q13478 541 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 KPNB1Q14974 876 aaKnown RBP15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ZNF146Q15072 292 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 TP53I3Q53FA7 332 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 SPIN3Q5JUX0 258 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 TRAPPC6BQ86SZ2 158 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 SGCDQ92629 289 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 RFKQ969G6 155 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 OAZ3Q9UMX2 235 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 UBE2J1Q9Y385 318 aaPredicted RBP15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 NBEAL2Q6ZNJ1 2754 aa15.8■□□□□ 0.12
TNFRSF1B-204ENST00000536782 FAM90A22PA8MWA6 464 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ENTPD6O75354 484 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 PRKACAP17612 351 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 PRKACBP22694 351 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ERP29P30040 261 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 SNU13P55769 128 aaKnown RBP15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ISL1P61371 349 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 TMEM95Q3KNT9 176 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 TMEM244Q5VVB8 128 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 MRAPQ8TCY5 172 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 EME1Q96AY2 570 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 ADAT3Q96EY9 351 aaPredicted RBP15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 GABARAPL3Q9BY60 117 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 RIBC2Q9H4K1 309 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 NECAP2Q9NVZ3 263 aa15.79■□□□□ 0.12
TNFRSF1B-204ENST00000536782 IGKV1-9A0A0C4DH69 117 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 74.7 ms