RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 UNC119Q13432 240 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 C2orf76Q3KRA6 126 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 FOXB2Q5VYV0 432 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 STUMQ69YW2 141 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 OSR2Q8N2R0 312 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 MUC20Q8N307 709 aaPredicted RBP11.46□□□□□ -0.57
CD44-224ENST00000526669 FGFRL1Q8N441 504 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 FAM216BQ8N7L0 139 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 ANGPTL6Q8NI99 470 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 LGALS14Q8TCE9 139 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 BCL7BQ9BQE9 202 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 BARHL1Q9BZE3 327 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 SELENOIQ9C0D9 397 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 LIN7BQ9HAP6 207 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 RASL12Q9NYN1 266 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 IL36GQ9NZH8 169 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 ZNF581Q9P0T4 197 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 RSL24D1Q9UHA3 163 aaKnown RBP11.46□□□□□ -0.57
CD44-224ENST00000526669 PCDHB10Q9UN67 800 aa11.46□□□□□ -0.57
CD44-224ENST00000526669 NKX6-3A6NJ46 265 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 SIRPB1O00241 398 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 HAND1O96004 215 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 KNG1P01042 644 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 UBBP0CG47 229 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 RPS2P15880 293 aaKnown RBP11.45□□□□□ -0.58
CD44-224ENST00000526669 MGMTP16455 207 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 AMY2BP19961 511 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 IL2RGP31785 369 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 RBM11P57052 281 aaKnown RBP11.45□□□□□ -0.58
CD44-224ENST00000526669 ELP2Q6IA86 826 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 FIP1L1Q6UN15 594 aaKnown RBP11.45□□□□□ -0.58
CD44-224ENST00000526669 SPICQ8N5J4 248 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 CD177Q8N6Q3 437 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 OR5H6Q8NGV6 325 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 SLC25A46Q96AG3 418 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 GAFA1Q96PS6 74 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 CTSZQ9UBR2 303 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 OR5V1Q9UGF6 321 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 ZNF222Q9UK12 451 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 ZANQ9Y493 2812 aa11.45□□□□□ -0.58
CD44-224ENST00000526669 TLN2Q9Y4G6 2542 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 A0A096LNT2 108 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 SMIM31A0A1B0GVY4 71 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 TMEM14DPA8MWL7 114 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 GEMIN2O14893 280 aaKnown RBP11.44□□□□□ -0.58
CD44-224ENST00000526669 SMAD7O15105 426 aaKnown RBP11.44□□□□□ -0.58
CD44-224ENST00000526669 ZNF780AO75290 641 aaPredicted RBP11.44□□□□□ -0.58
CD44-224ENST00000526669 IGHV2-5P01817 119 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 ZNF44P15621 663 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 GABRR1P24046 479 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 PRDX2P32119 198 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 EFNB2P52799 333 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 CAPZA1P52907 286 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 SEC61A1P61619 476 aaKnown RBP11.44□□□□□ -0.58
CD44-224ENST00000526669 QRFPP83859 136 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 COL10A1Q03692 680 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 IKZF1Q13422 519 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 GPR176Q14439 515 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 TAF9Q16594 264 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 TMEM155Q4W5P6 130 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 DCDC5Q6ZRR9 648 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 ASCC1Q8N9N2 400 aaKnown RBP11.44□□□□□ -0.58
CD44-224ENST00000526669 CYYR1Q96J86 154 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 NICN1Q9BSH3 213 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 DCUN1D5Q9BTE7 237 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 TMEM59Q9BXS4 323 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 REG4Q9BYZ8 158 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 CST11Q9H112 138 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 ZNF665Q9H7R5 613 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 PATZ1Q9HBE1 687 aaKnown RBP11.44□□□□□ -0.58
CD44-224ENST00000526669 GHRLQ9UBU3 117 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 ST3GAL6Q9Y274 331 aa11.44□□□□□ -0.58
CD44-224ENST00000526669 CSPG4Q6UVK1 2322 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 A0A0A6YYD4 124 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 H7C1Q1 480 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 HSPB6O14558 160 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 TNFRSF13BO14836 293 aaPredicted RBP11.43□□□□□ -0.58
CD44-224ENST00000526669 TMPRSS2O15393 492 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 FCN3O75636 299 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 OR2H2O95918 312 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 GTF2F2P13984 249 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 USF1P22415 310 aaPredicted RBP11.43□□□□□ -0.58
CD44-224ENST00000526669 CFPP27918 469 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 RORCP51449 518 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 BMXP51813 675 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 IL13RA2Q14627 380 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 KCNJ8Q15842 424 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 Q6P435 159 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 ZNF788Q6ZQV5 615 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 OR2W3Q7Z3T1 314 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 CIARTQ8N365 385 aaPredicted RBP11.43□□□□□ -0.58
CD44-224ENST00000526669 ZNRF1Q8ND25 227 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 TMEM185AQ8NFB2 350 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 Q8NFD4 153 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 OR8B3Q8NGG8 313 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 OR51T1Q8NGJ9 327 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 KCNG3Q8TAE7 436 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 DYNC2LI1Q8TCX1 351 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 Q96M66 194 aa11.43□□□□□ -0.58
CD44-224ENST00000526669 OR8B2Q96RD0 313 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms