RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 SAXO1Q8IYX7 474 aa10.61□□□□□ -0.71
VEGFA-224ENST00000523873 ZSCAN4Q8NAM6 433 aaPredicted RBP10.61□□□□□ -0.71
VEGFA-224ENST00000523873 MED30Q96HR3 178 aa10.61□□□□□ -0.71
VEGFA-224ENST00000523873 KIR2DS1A0A191URI9 304 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 A0A1W2PP11 408 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 TMEM82A0PJX8 343 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 SIRPB1O00241 398 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 ENSAO43768 121 aaKnown RBP10.6□□□□□ -0.71
VEGFA-224ENST00000523873 HTR3BO95264 441 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 UCHL1P09936 223 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 GABRA5P31644 462 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 SRP14P37108 136 aaKnown RBP10.6□□□□□ -0.71
VEGFA-224ENST00000523873 PTGFRP43088 359 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 PAX8Q06710 450 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 ZNF561Q8N587 486 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 ASCC1Q8N9N2 400 aaKnown RBP10.6□□□□□ -0.71
VEGFA-224ENST00000523873 PXT1Q8NFP0 134 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 FCGR1BQ92637 280 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 NR1H4Q96RI1 486 aaPredicted RBP10.6□□□□□ -0.71
VEGFA-224ENST00000523873 DCTN5Q9BTE1 182 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 CNTD2Q9H8S5 307 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 TCF7L1Q9HCS4 588 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 NDUFB11Q9NX14 153 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 RPUSD1Q9UJJ7 312 aaKnown RBP10.6□□□□□ -0.71
VEGFA-224ENST00000523873 CDC42EP3Q9UKI2 254 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 AUP1Q9Y679 476 aa10.6□□□□□ -0.71
VEGFA-224ENST00000523873 MTORP42345 2549 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 IGHV3OR16-10A0A075B7F0 116 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 MEX3AA1L020 520 aaKnown RBP10.59□□□□□ -0.71
VEGFA-224ENST00000523873 J3QLI3 93 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 CCRL2O00421 344 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 ZNF737O75373 536 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 TK1P04183 234 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 CHRM2P08172 466 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 SRMP19623 302 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 HNF1AP20823 631 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 SERPINA2P20848 420 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 GATA3P23771 443 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 DLX1P56177 255 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 FGF12P61328 243 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 PRB3Q04118 309 aaPredicted RBP10.59□□□□□ -0.71
VEGFA-224ENST00000523873 SCN1BQ07699 218 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 RSU1Q15404 277 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 TRAM1Q15629 374 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 PIGYQ3MUY2 71 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 CD276Q5ZPR3 534 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 FIP1L1Q6UN15 594 aaKnown RBP10.59□□□□□ -0.71
VEGFA-224ENST00000523873 ASCL4Q6XD76 172 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 LYPD6Q86Y78 171 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 PNLDC1Q8NA58 520 aaKnown RBP10.59□□□□□ -0.71
VEGFA-224ENST00000523873 TSPAN14Q8NG11 270 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 OR4S1Q8NGB4 309 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 OR4M1Q8NGD0 313 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 OR4D6Q8NGJ1 314 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 THRSPQ92748 146 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 CPNE2Q96FN4 548 aaPredicted RBP10.59□□□□□ -0.71
VEGFA-224ENST00000523873 GFI1Q99684 422 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 MRI1Q9BV20 369 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 CHST6Q9GZX3 395 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 EXOSC4Q9NPD3 245 aaKnown RBP10.59□□□□□ -0.71
VEGFA-224ENST00000523873 C19orf12Q9NSK7 152 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 ZNF581Q9P0T4 197 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 LPAR3Q9UBY5 353 aa10.59□□□□□ -0.71
VEGFA-224ENST00000523873 MRPS28Q9Y2Q9 187 aaKnown RBP10.59□□□□□ -0.71
VEGFA-224ENST00000523873 NSD1Q96L73 2696 aaPredicted RBP10.59□□□□□ -0.71
VEGFA-224ENST00000523873 SHISA3A0PJX4 238 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 PSPNO60542 156 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 TNFAIP8O95379 198 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 OR2H2O95918 312 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 PPIAL4GP0DN37 164 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 SRD5A1P18405 259 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 PSMA1P25786 263 aaKnown RBP10.58□□□□□ -0.72
VEGFA-224ENST00000523873 CALRP27797 417 aaKnown RBP10.58□□□□□ -0.72
VEGFA-224ENST00000523873 MTNR1BP49286 362 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 CAV3P56539 151 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 ARF6P62330 175 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 EDDM3AQ14507 147 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 ZNF146Q15072 292 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 SLC22A6Q4U2R8 563 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 AWAT2Q6E213 333 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 Q6P435 159 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 GLIPR1L1Q6UWM5 242 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 FAM185AQ8N0U4 392 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 TPRX1Q8N7U7 411 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 NKAIN3Q8N8D7 197 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 LY6G5BQ8NDX9 201 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 PHYHIPQ92561 330 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 PCGF1Q9BSM1 259 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 METTL9Q9H1A3 318 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 KCNK15Q9H427 330 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 ZNF696Q9H7X3 374 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 ONECUT1Q9UBC0 465 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 AK6Q9Y3D8 172 aaKnown RBP10.58□□□□□ -0.72
VEGFA-224ENST00000523873 NAV3Q8IVL0 2385 aa10.58□□□□□ -0.72
VEGFA-224ENST00000523873 TRAV40A0A0B4J280 105 aa10.57□□□□□ -0.72
VEGFA-224ENST00000523873 TRDV1A0A1B0GX56 115 aa10.57□□□□□ -0.72
VEGFA-224ENST00000523873 A0A1W2PQ09 198 aa10.57□□□□□ -0.72
VEGFA-224ENST00000523873 K7N7A8 449 aa10.57□□□□□ -0.72
VEGFA-224ENST00000523873 HSPB6O14558 160 aa10.57□□□□□ -0.72
VEGFA-224ENST00000523873 ECDO95905 644 aaPredicted RBP10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms