RNA–Protein interactions for RNA: ENST00000513352.1

NUP54-213, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-213ENST00000513352 IFITM5A6NNB3 132 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 AIPO00170 330 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 SH2D1BO14796 132 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 BPNT1O95861 308 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 MPIG6BO95866 241 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 SLC2A2P11168 524 aaPredicted RBP12.48□□□□□ -0.41
NUP54-213ENST00000513352 GTF2F2P13984 249 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 SELLP14151 372 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 ZNF44P15621 663 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 ARSBP15848 533 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 RANBP1P43487 201 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 SEC61A1P61619 476 aaKnown RBP12.48□□□□□ -0.41
NUP54-213ENST00000513352 GNB2P62879 340 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 IL13RA1P78552 427 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 PDCD1Q15116 288 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 SPIN3Q5JUX0 258 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 SFXN4Q6P4A7 337 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 NR2C2APQ86WQ0 139 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 CD177Q8N6Q3 437 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 TMEM185AQ8NFB2 350 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 OR51D1Q8NGF3 324 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 ST8SIA4Q92187 359 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 MED30Q96HR3 178 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 GAFA1Q96PS6 74 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 CTSZQ9UBR2 303 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 GHRLQ9UBU3 117 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 CSMD1Q96PZ7 3565 aa12.48□□□□□ -0.41
NUP54-213ENST00000513352 FLNAP21333 2647 aaKnown RBP12.47□□□□□ -0.41
NUP54-213ENST00000513352 A0A0B4J203 849 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 A0A0G2JK05 382 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 F5H0A9 414 aaPredicted RBP12.47□□□□□ -0.41
NUP54-213ENST00000513352 SIRPB1O00241 398 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 DVL1O14640 695 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 SIGLEC5O15389 551 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 PHF1O43189 567 aaPredicted RBP12.47□□□□□ -0.41
NUP54-213ENST00000513352 NDUFB3O43676 98 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 CHRM2P08172 466 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 WNT2P09544 360 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 MGMTP16455 207 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 GABRR1P24046 479 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 RBM11P57052 281 aaKnown RBP12.47□□□□□ -0.41
NUP54-213ENST00000513352 LCN2P80188 198 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 COL10A1Q03692 680 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 CTF1Q16619 201 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 TMEM249Q2WGJ8 235 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 LRRC10Q5BKY1 277 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 IDNKQ5T6J7 187 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 ELP2Q6IA86 826 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 OR10K2Q6IF99 312 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 ZNF788Q6ZQV5 615 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 ZNRF1Q8ND25 227 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 NDNFQ8TB73 568 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 RAB2BQ8WUD1 216 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 FAM3DQ96BQ1 224 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 COX4I2Q96KJ9 171 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 SSBP3Q9BWW4 388 aaPredicted RBP12.47□□□□□ -0.41
NUP54-213ENST00000513352 TMEM59Q9BXS4 323 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 SELENOIQ9C0D9 397 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 DNTTIP1Q9H147 329 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 LIN7BQ9HAP6 207 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 CLN8Q9UBY8 286 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 METRNQ9UJH8 293 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 ZNF222Q9UK12 451 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 ST3GAL6Q9Y274 331 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 OTOGQ6ZRI0 2925 aa12.47□□□□□ -0.41
NUP54-213ENST00000513352 YLPM1P49750 1951 aaKnown RBP12.47□□□□□ -0.41
NUP54-213ENST00000513352 FAM157AC9JC47 383 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 HSPB6O14558 160 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 DEGS1O15121 323 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 OR7C1O76099 320 aaPredicted RBP12.46□□□□□ -0.41
NUP54-213ENST00000513352 IL1AP01583 271 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 VSIG8P0DPA2 414 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 CD99P14209 185 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 NDUFB7P17568 137 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 AMY2BP19961 511 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 RPS19P39019 145 aaKnown RBP12.46□□□□□ -0.41
NUP54-213ENST00000513352 GZMKP49863 264 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 TMBIM6P55061 237 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 IL13RA2Q14627 380 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 ZNF146Q15072 292 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 ATPAF1Q5TC12 328 aaPredicted RBP12.46□□□□□ -0.41
NUP54-213ENST00000513352 FAM166AQ6J272 317 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 USP43Q70EL4 1123 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 ZNF561Q8N587 486 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 TMEM104Q8NE00 496 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 KCNG3Q8TAE7 436 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 H1FXQ92522 213 aaKnown RBP12.46□□□□□ -0.41
NUP54-213ENST00000513352 SLC25A28Q96A46 364 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 C18orf12Q96KH6 178 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 C1orf147Q96MC9 270 aaPredicted RBP12.46□□□□□ -0.41
NUP54-213ENST00000513352 DCSTAMPQ9H295 470 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 KAAG1Q9UBP8 84 aa12.46□□□□□ -0.41
NUP54-213ENST00000513352 SLC25A10Q9UBX3 287 aaPredicted RBP12.46□□□□□ -0.41
NUP54-213ENST00000513352 MALRD1Q5VYJ5 2156 aa12.45□□□□□ -0.42
NUP54-213ENST00000513352 ABCA2Q9BZC7 2435 aa12.45□□□□□ -0.42
NUP54-213ENST00000513352 TNFRSF13BO14836 293 aaPredicted RBP12.45□□□□□ -0.42
NUP54-213ENST00000513352 GEMIN2O14893 280 aaKnown RBP12.45□□□□□ -0.42
NUP54-213ENST00000513352 OR2H2O95918 312 aa12.45□□□□□ -0.42
NUP54-213ENST00000513352 INHBBP09529 407 aa12.45□□□□□ -0.42
NUP54-213ENST00000513352 IGHV4-31P0DP07 118 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms