RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 BMP5P22003 454 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 SLC26A1Q9H2B4 701 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 OR6C3Q9NZP0 311 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 FAM24AA6NFZ4 105 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 CCL2P13500 99 aa14.62□□□□□ -0.07
PCDHA1-203ENST00000504120 MAP1LC3B2A6NCE7 125 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 TPPP2P59282 170 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 HES3Q5TGS1 186 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 PTPMT1Q8WUK0 201 aaPredicted RBP14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 MAP1LC3BQ9GZQ8 125 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 SLC35B3Q9H1N7 401 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 ANXA10Q9UJ72 324 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 ARL2-SNX15V9GYD0 113 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 PLXNB2O15031 1838 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 LRRC3CA6NJW4 275 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 OPRK1P41145 380 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 IRF3Q14653 427 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 TMEM211Q6ICI0 200 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 SPINK14Q6IE38 97 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 ZNF426Q9BUY5 554 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 ESRP2Q9H6T0 727 aaKnown RBP14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 WISP3O95389 354 aaPredicted RBP14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 ACTL6AO96019 429 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 COL19A1Q14993 1142 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 KLHDC1Q8N7A1 406 aa14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 BCL2L2Q92843 193 aaPredicted RBP14.61□□□□□ -0.07
PCDHA1-203ENST00000504120 TCRBV16S1A1N1A0A5B0 115 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 ZNF785A8K8V0 405 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 RBP4P02753 201 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 TMIGD3P0DMS9 266 aaPredicted RBP14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 OR3A1P47881 315 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 MOGAT2Q3SYC2 334 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 OR2I1PQ8NGU4 316 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 WDR61Q9GZS3 305 aaKnown RBP14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 SLC52A3Q9NQ40 469 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 FBXL17Q9UF56 701 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 AMDHD2Q9Y303 409 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 A0A1B0GTQ1 180 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 OR4C45A6NMZ5 311 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 CLDN34H7C241 214 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 B3GALNT1O75752 331 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 GABRA1P14867 456 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 TMEM241Q24JQ0 296 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 ETV3LQ6ZN32 361 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 ZDHHC16Q969W1 377 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 TMEM147Q9BVK8 224 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 STARD10Q9Y365 291 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 ADTRPQ96IZ2 230 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 WDR13Q9H1Z4 485 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 TNS1Q9HBL0 1735 aaKnown RBP14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 A0A1W2PN81 502 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 TRDCB7Z8K6 153 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 EML2O95834 649 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 CHRNA7P36544 502 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 GZMMP51124 257 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 PAX5Q02548 391 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 IL24Q13007 206 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 LIAT1Q6ZQX7 453 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 OR4F17Q8NGA8 305 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 C12orf57Q99622 126 aa14.6□□□□□ -0.07
PCDHA1-203ENST00000504120 BGLAPP02818 100 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 BMI1P35226 326 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 RANP62826 216 aaKnown RBP14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 EIF4EBP2Q13542 120 aaPredicted RBP14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 NHLRC2Q8NBF2 726 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 MRGPRDQ8TDS7 321 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 IL36GQ9NZH8 169 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 C21orf140B9A014 251 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 SPINT1O43278 529 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 HSBP1O75506 76 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 PRRX1P54821 245 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 B3GNTL1Q67FW5 361 aaPredicted RBP14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 TRAPPC1Q9Y5R8 145 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 R4GN57 208 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 HRKO00198 91 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 FCER1GP30273 86 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 RHOBP62745 196 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 ZAR1Q86SH2 424 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 CCL17Q92583 94 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 AMMECR1Q9Y4X0 333 aaPredicted RBP14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 POMT1Q9Y6A1 747 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 PNPP00491 289 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 GAB4Q2WGN9 574 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 Q56UQ5 140 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 C10orf111Q8N326 155 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 MISP3Q96FF7 219 aa14.59□□□□□ -0.07
PCDHA1-203ENST00000504120 RGS13O14921 159 aa14.58□□□□□ -0.07
PCDHA1-203ENST00000504120 IL9P15248 144 aa14.58□□□□□ -0.07
PCDHA1-203ENST00000504120 MIXL1Q9H2W2 232 aa14.58□□□□□ -0.07
PCDHA1-203ENST00000504120 KCNK15Q9H427 330 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 SEBOXQ9HB31 216 aaPredicted RBP14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 GPR27Q9NS67 375 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 CACNA1CQ13936 2221 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 OR5H1A6NKK0 313 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 P2RY1P47900 373 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 CDC34P49427 236 aaPredicted RBP14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 KRTDAPP60985 99 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 TOLLIPQ9H0E2 274 aa14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 MRPS18AQ9NVS2 196 aaKnown RBP14.58□□□□□ -0.08
PCDHA1-203ENST00000504120 CES1P1Q9UKY3 287 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms