RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 IKZF1Q13422 519 aa20.66■□□□□ 0.9
PPP1R3F-205ENST00000495799 SPIN3Q5JUX0 258 aa20.66■□□□□ 0.9
PPP1R3F-205ENST00000495799 ATAD3CQ5T2N8 411 aa20.66■□□□□ 0.9
PPP1R3F-205ENST00000495799 STEAP1BQ6NZ63 245 aa20.66■□□□□ 0.9
PPP1R3F-205ENST00000495799 C11orf53Q8IXP5 236 aa20.66■□□□□ 0.9
PPP1R3F-205ENST00000495799 GTF3AQ92664 365 aaKnown RBP20.66■□□□□ 0.9
PPP1R3F-205ENST00000495799 ERGIC1Q969X5 290 aa20.66■□□□□ 0.9
PPP1R3F-205ENST00000495799 ANAPC10Q9UM13 185 aa20.66■□□□□ 0.9
PPP1R3F-205ENST00000495799 PLEKHA6Q9Y2H5 1048 aa20.66■□□□□ 0.9
PPP1R3F-205ENST00000495799 ZNF736B4DX44 427 aaPredicted RBP20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 M0R233 179 aa20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 MT-ND4P03905 459 aa20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 GLAP06280 429 aa20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 TBPP20226 339 aa20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 TNFAIP6P98066 277 aaPredicted RBP20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 EFNB3Q15768 340 aa20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 ACTBL2Q562R1 376 aa20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 WDR82Q6UXN9 313 aa20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 PIK3IP1Q96FE7 263 aa20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 IFT22Q9H7X7 185 aa20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 C1orf123Q9NWV4 160 aa20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 RCC2Q9P258 522 aaKnown RBP20.65■□□□□ 0.9
PPP1R3F-205ENST00000495799 IGHV1-46P01743 117 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 PRB1P04280 392 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 GATA4P43694 442 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 MEF2DQ14814 521 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 RTN4RL2Q86UN3 420 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 CMSS1Q9BQ75 279 aaKnown RBP20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 FAAP24Q9BTP7 215 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 CHST6Q9GZX3 395 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 HES4Q9HCC6 221 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 UFSP2Q9NUQ7 469 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 FAIMQ9NVQ4 179 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 MCUBQ9NWR8 336 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 RASL12Q9NYN1 266 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 NLKQ9UBE8 527 aa20.64■□□□□ 0.9
PPP1R3F-205ENST00000495799 IGHV3-64DA0A0J9YX35 117 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 B9A039 149 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 MCRIP1C9JLW8 97 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 RAB3DO95716 219 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 NAT1P18440 290 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 DTYMKP23919 212 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 CFHR2P36980 270 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 MPPED2Q15777 294 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 ITLN1Q8WWA0 313 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 DHRS9Q9BPW9 319 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 SULT4A1Q9BR01 284 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 TMEM204Q9BSN7 226 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 CACNG6Q9BXT2 260 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 EDARQ9UNE0 448 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 CADP27708 2225 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 hCG_2014768A0A024R1R8 64 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 C17orf100A8MU93 164 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 DEFB108AA8MXU0 73 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 CD74P04233 296 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 CD3DP04234 171 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 CD55P08174 381 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 GLRA1P23415 457 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 BTCP35070 178 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 RBM39Q14498 530 aaKnown RBP20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 ZNF146Q15072 292 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 SMIM21Q3B7S5 101 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 ZNF672Q499Z4 452 aaPredicted RBP20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 PLA1AQ53H76 456 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 OR4C16Q8NGL9 310 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 FAM222BQ8WU58 562 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 CISD1Q9NZ45 108 aaKnown RBP20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 AK3Q9UIJ7 227 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 NUBP2Q9Y5Y2 271 aa20.63■□□□□ 0.89
PPP1R3F-205ENST00000495799 SH2D1BO14796 132 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 DEGS1O15121 323 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 TNFRSF1AP19438 455 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 GIFP27352 417 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 TESK1Q15569 626 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 FAM209AQ5JX71 171 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 ZNF782Q6ZMW2 699 aaPredicted RBP20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 ZNF826PQ6ZT77 177 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 HOGA1Q86XE5 327 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 GVQW1Q8N7I0 195 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 LRRC29Q8WV35 223 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 FBXW5Q969U6 566 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 CREB3L1Q96BA8 519 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 HS3ST6Q96QI5 342 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 MMP28Q9H239 520 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 MS4A5Q9H3V2 200 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 DYNLRB1Q9NP97 96 aa20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 DIDO1Q9BTC0 2240 aaKnown RBP20.62■□□□□ 0.89
PPP1R3F-205ENST00000495799 SIAH2O43255 324 aa20.61■□□□□ 0.89
PPP1R3F-205ENST00000495799 KNG1P01042 644 aa20.61■□□□□ 0.89
PPP1R3F-205ENST00000495799 PDCD1Q15116 288 aa20.61■□□□□ 0.89
PPP1R3F-205ENST00000495799 RNASE10Q5GAN6 216 aaKnown RBP20.61■□□□□ 0.89
PPP1R3F-205ENST00000495799 FAM90A1Q86YD7 464 aa20.61■□□□□ 0.89
PPP1R3F-205ENST00000495799 OR11L1Q8NGX0 322 aa20.61■□□□□ 0.89
PPP1R3F-205ENST00000495799 EGLN1Q9GZT9 426 aa20.61■□□□□ 0.89
PPP1R3F-205ENST00000495799 IL36RNQ9UBH0 155 aa20.61■□□□□ 0.89
PPP1R3F-205ENST00000495799 FBXO9Q9UK97 447 aaPredicted RBP20.61■□□□□ 0.89
PPP1R3F-205ENST00000495799 DISC1C4P0D8 188 aa20.6■□□□□ 0.89
PPP1R3F-205ENST00000495799 ZNF44P15621 663 aa20.6■□□□□ 0.89
PPP1R3F-205ENST00000495799 AMY2BP19961 511 aa20.6■□□□□ 0.89
PPP1R3F-205ENST00000495799 HLA-DMAP28067 261 aa20.6■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms