RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 PDZK1IP1Q13113 114 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 OR2G6Q5TZ20 316 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 DHRS7BQ6IAN0 325 aaPredicted RBP8.62□□□□□ -1.03
NELFE-213ENST00000494956 BAIAP2L2Q6UXY1 529 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 UTS2BQ765I0 119 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 GDPD3Q7L5L3 318 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 KCTD20Q7Z5Y7 419 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 FAM58AQ8N1B3 248 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 ZSCAN4Q8NAM6 433 aaPredicted RBP8.62□□□□□ -1.03
NELFE-213ENST00000494956 BEND2Q8NDZ0 799 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 CCDC54Q8NEL0 328 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 OR5D13Q8NGL4 314 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 PPP1R35Q8TAP8 253 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 PP6455Q8WZ26 134 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 OPALINQ96PE5 141 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 ZNF696Q9H7X3 374 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 ING3Q9NXR8 418 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 HHLA2Q9UM44 414 aa8.62□□□□□ -1.03
NELFE-213ENST00000494956 TRBV2A0A0J9YWF9 115 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 BTBD17A6NE02 478 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 C17orf98A8MV24 154 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 ANKRD65E5RJM6 399 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 LIMS3P0CW19 117 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 LIMS4P0CW20 117 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 OR3A1P47881 315 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 SOX2P48431 317 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 ETV1P50549 477 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 PROK1P58294 105 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 ACTA2P62736 377 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 ACTG2P63267 376 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 ACSM1Q08AH1 577 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 IL18R1Q13478 541 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 GRK1Q15835 563 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 SLC35E4Q6ICL7 350 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 GDPGP1Q6ZNW5 385 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 LHFPL2Q6ZUX7 228 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 OR8H2Q8N162 312 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 DNAAF1Q8NEP3 725 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 PIFOQ8TCI5 191 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 RGP1Q92546 391 aaPredicted RBP8.61□□□□□ -1.03
NELFE-213ENST00000494956 C10orf35Q96D05 121 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 ORAI1Q96D31 301 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 SNX22Q96L94 193 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 CITED1Q99966 193 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 FAM234AQ9H0X4 552 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 NEK6Q9HC98 313 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 SMPD3Q9NY59 655 aaPredicted RBP8.61□□□□□ -1.03
NELFE-213ENST00000494956 GSTK1Q9Y2Q3 226 aa8.61□□□□□ -1.03
NELFE-213ENST00000494956 SIRT4Q9Y6E7 314 aaPredicted RBP8.61□□□□□ -1.03
NELFE-213ENST00000494956 FAM172BPA6NC97 362 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 SNTNA6NMZ2 147 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 KCNAB3O43448 404 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 WIPF1O43516 503 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 CHST1O43916 411 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 FADS2O95864 444 aaKnown RBP8.6□□□□□ -1.03
NELFE-213ENST00000494956 OR2H2O95918 312 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 ARG1P05089 322 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 OCM2P0CE71 109 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 OCMP0CE72 109 aaPredicted RBP8.6□□□□□ -1.03
NELFE-213ENST00000494956 ZNF728P0DKX0 622 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 IGHV1-8P0DP01 117 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 PRKACBP22694 351 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 PEX2P28328 305 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 GDNFP39905 211 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 SCN1BQ07699 218 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 RAB40BQ12829 278 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 MIDNQ504T8 468 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 UTF1Q5T230 341 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 ASPHD2Q6ICH7 369 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 CCBE1Q6UXH8 406 aaPredicted RBP8.6□□□□□ -1.03
NELFE-213ENST00000494956 TREML4Q6UXN2 200 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 SYS1Q8N2H4 156 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 OR51A2Q8NGJ7 313 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 OR13C5Q8NGS8 318 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 OR5AK2Q8NH90 309 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 TSEN15Q8WW01 171 aaKnown RBP8.6□□□□□ -1.03
NELFE-213ENST00000494956 CYGBQ8WWM9 190 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 MEGF9Q9H1U4 602 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 ZCCHC4Q9H5U6 513 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 HEXA-AS1Q9H8Q6 139 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 HMG20AQ9NP66 347 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.6□□□□□ -1.03
NELFE-213ENST00000494956 RPL36Q9Y3U8 105 aaKnown RBP8.6□□□□□ -1.03
NELFE-213ENST00000494956 PKD1L1Q8TDX9 2849 aa8.6□□□□□ -1.03
NELFE-213ENST00000494956 A0A1B0GUS0 222 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 A0A1W2PPH5 198 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 ODF3BA8MYP8 253 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 MPZL2O60487 215 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 TSPAN9O75954 239 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 CLPXO76031 633 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 KDM4BO94953 1096 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 CYB5AP00167 134 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 LALBAP00709 142 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 HCKP08631 526 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 TMEM225BP0DP42 221 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 TGFBR2P37173 567 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 GLIPR1P48060 266 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 GBX2P52951 348 aaPredicted RBP8.59□□□□□ -1.03
NELFE-213ENST00000494956 LGALS4P56470 323 aa8.59□□□□□ -1.03
NELFE-213ENST00000494956 ZP1P60852 638 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms