RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 ACSM1Q08AH1 577 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 LY6EQ16553 131 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 UTF1Q5T230 341 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 OR2G6Q5TZ20 316 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 SYS1Q8N2H4 156 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 BEND2Q8NDZ0 799 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 CCDC54Q8NEL0 328 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 OR5D13Q8NGL4 314 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 OR13C3Q8NGS6 347 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 EMG1Q92979 244 aaKnown RBP10.23□□□□□ -0.77
HSPG2-212ENST00000493940 ORAI1Q96D31 301 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 SNX22Q96L94 193 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 SSX3Q99909 188 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 FAM234AQ9H0X4 552 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 FGF20Q9NP95 211 aaPredicted RBP10.23□□□□□ -0.77
HSPG2-212ENST00000493940 CLEC2DQ9UHP7 191 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 HHLA2Q9UM44 414 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 TGP01266 2768 aa10.23□□□□□ -0.77
HSPG2-212ENST00000493940 FAM90A8PA6NJQ4 464 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 H3BUX3 64 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 HAND1O96004 215 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 SERPINA3P01011 423 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 CRYBA1P05813 215 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 PRKACAP17612 351 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 EEF1B2P24534 225 aaKnown RBP10.22□□□□□ -0.77
HSPG2-212ENST00000493940 OR3A1P47881 315 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 EDDM3BP56851 147 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 ZP1P60852 638 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 ADARB1P78563 741 aaKnown RBP10.22□□□□□ -0.77
HSPG2-212ENST00000493940 RAB40BQ12829 278 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 IL18R1Q13478 541 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 ZNF146Q15072 292 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 CNN3Q15417 329 aaKnown RBP10.22□□□□□ -0.77
HSPG2-212ENST00000493940 PDLIM3Q53GG5 364 aaPredicted RBP10.22□□□□□ -0.77
HSPG2-212ENST00000493940 ZNF691Q5VV52 312 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 NCR3LG1Q68D85 454 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 SLC35E4Q6ICL7 350 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 Q6P435 159 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 CCBE1Q6UXH8 406 aaPredicted RBP10.22□□□□□ -0.77
HSPG2-212ENST00000493940 OR8H2Q8N162 312 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 FAM58AQ8N1B3 248 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 ZNF676Q8N7Q3 588 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 OR51A2Q8NGJ7 313 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 OR4F5Q8NH21 305 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 RPS4Y2Q8TD47 263 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 OPALINQ96PE5 141 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 CITED1Q99966 193 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 DPAGT1Q9H3H5 408 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 BEX1Q9HBH7 125 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 HMG20AQ9NP66 347 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 SMPD3Q9NY59 655 aaPredicted RBP10.22□□□□□ -0.77
HSPG2-212ENST00000493940 ZNF581Q9P0T4 197 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 VPREB3Q9UKI3 123 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 SIGLEC9Q9Y336 463 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 SF3B6Q9Y3B4 125 aaKnown RBP10.22□□□□□ -0.77
HSPG2-212ENST00000493940 RNF114Q9Y508 228 aa10.22□□□□□ -0.77
HSPG2-212ENST00000493940 TRBV2A0A0J9YWF9 115 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 FADS2O95864 444 aaKnown RBP10.21□□□□□ -0.77
HSPG2-212ENST00000493940 MT-ND2P03891 347 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 ZNF20P17024 532 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 PEX2P28328 305 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 GDNFP39905 211 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 BLMHQ13867 455 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 EDDM3AQ14507 147 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 CDK5R1Q15078 307 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 MIDNQ504T8 468 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 ZNF529Q6P280 563 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 LHFPL2Q6ZUX7 228 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 PPA2Q9H2U2 334 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 ZCCHC4Q9H5U6 513 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 C16orf95Q9H693 158 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 SEBOXQ9HB31 216 aaPredicted RBP10.21□□□□□ -0.77
HSPG2-212ENST00000493940 GSTK1Q9Y2Q3 226 aa10.21□□□□□ -0.77
HSPG2-212ENST00000493940 PRKDCP78527 4128 aaKnown RBP10.21□□□□□ -0.78
HSPG2-212ENST00000493940 PLXNB1O43157 2135 aa10.21□□□□□ -0.78
HSPG2-212ENST00000493940 ODF3BA8MYP8 253 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 SIRPB1O00241 398 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 CHST1O43916 411 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 MPZL2O60487 215 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 TSPAN9O75954 239 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 CLPXO76031 633 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 KDM4BO94953 1096 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 OR2H2O95918 312 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 GNAO1P09471 354 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 ZNF728P0DKX0 622 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 IGHV1-8P0DP01 117 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 PRKACBP22694 351 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 SOX2P48431 317 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 ACTA2P62736 377 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 ACTG2P63267 376 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 GRK1Q15835 563 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 PLA1AQ53H76 456 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 FBLN7Q53RD9 439 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 C10orf67Q8IYJ2 551 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 PARP16Q8N5Y8 322 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 ZNF485Q8NCK3 441 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 OR13C5Q8NGS8 318 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 OR5AK2Q8NH90 309 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 SPSB1Q96BD6 273 aa10.2□□□□□ -0.78
HSPG2-212ENST00000493940 CYYR1Q96J86 154 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms