RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 IFNL4K9M1U5 179 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 SIRPB1O00241 398 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 SOCS1O15524 211 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 CPT2P23786 658 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 GABRA2P47869 451 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 BTG1P62324 171 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 MRPS11P82912 194 aaKnown RBP16.24■□□□□ 0.19
USP39-218ENST00000493829 MICBQ29980 383 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 CNIH2Q6PI25 160 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 CDH24Q86UP0 819 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 Q8NFD4 153 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 OR4M1Q8NGD0 313 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 OR6Q1Q8NGQ2 317 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 PHF21AQ96BD5 680 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 LURAP1Q96LR2 239 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 NARFLQ9H6Q4 476 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 CHODLQ9H9P2 273 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 RHOFQ9HBH0 211 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 EXTL2Q9UBQ6 330 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 PEX16Q9Y5Y5 336 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 CSMD2Q7Z408 3487 aa16.24■□□□□ 0.19
USP39-218ENST00000493829 SPG11Q96JI7 2443 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 UNC79Q9P2D8 2635 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 LGALS8O00214 317 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 HAND1O96004 215 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 KNG1P01042 644 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 APOA1P02647 267 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 PSG2P11465 335 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 ZNF44P15621 663 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 CDK2P24941 298 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 PITPNBP48739 271 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 ATAD3CQ5T2N8 411 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 BRICD5Q6PL45 260 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 LRRC28Q86X40 367 aaPredicted RBP16.23■□□□□ 0.19
USP39-218ENST00000493829 CHST4Q8NCG5 386 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 PTX4Q96A99 478 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 MRPS24Q96EL2 167 aaKnown RBP16.23■□□□□ 0.19
USP39-218ENST00000493829 TM2D1Q9BX74 207 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 METRNQ9UJH8 293 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 ADAM30Q9UKF2 790 aa16.23■□□□□ 0.19
USP39-218ENST00000493829 IGKV1D-17A0A075B6S4 117 aa16.22■□□□□ 0.19
USP39-218ENST00000493829 METTL21EPA6NDL7 271 aa16.22■□□□□ 0.19
USP39-218ENST00000493829 TNFSF8P32971 234 aa16.22■□□□□ 0.19
USP39-218ENST00000493829 SPIN3Q5JUX0 258 aa16.22■□□□□ 0.19
USP39-218ENST00000493829 PEG10Q86TG7 708 aaKnown RBP16.22■□□□□ 0.19
USP39-218ENST00000493829 CD177Q8N6Q3 437 aa16.22■□□□□ 0.19
USP39-218ENST00000493829 DIRAS2Q96HU8 199 aa16.22■□□□□ 0.19
USP39-218ENST00000493829 GSX2Q9BZM3 304 aa16.22■□□□□ 0.19
USP39-218ENST00000493829 ABCG5Q9H222 651 aa16.22■□□□□ 0.19
USP39-218ENST00000493829 ZMAT3Q9HA38 289 aaKnown RBP16.22■□□□□ 0.19
USP39-218ENST00000493829 EDARQ9UNE0 448 aa16.22■□□□□ 0.19
USP39-218ENST00000493829 A0A1B0GW55 424 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 OR2H2O95918 312 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 DUX4L2P0CJ85 424 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 DUX4L3P0CJ86 424 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 DUX4L4P0CJ87 422 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 DUX4L5P0CJ88 424 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 DUX4L6P0CJ89 424 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 DUX4L7P0CJ90 424 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 BLVRBP30043 206 aaPredicted RBP16.21■□□□□ 0.19
USP39-218ENST00000493829 IL13RA2Q14627 380 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 DEFB113Q30KQ7 82 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 NHLRC3Q5JS37 347 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 TEX36Q5VZQ5 186 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 STUMQ69YW2 141 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 DUX4L9Q6RFH8 374 aaPredicted RBP16.21■□□□□ 0.19
USP39-218ENST00000493829 OR56B1Q8NGI3 324 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 S100A16Q96FQ6 103 aaKnown RBP16.21■□□□□ 0.19
USP39-218ENST00000493829 TIMD4Q96H15 378 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 CCL13Q99616 98 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 BARX1Q9HBU1 254 aaPredicted RBP16.21■□□□□ 0.19
USP39-218ENST00000493829 DUX4Q9UBX2 424 aa16.21■□□□□ 0.19
USP39-218ENST00000493829 ANKRD17O75179 2603 aaKnown RBP16.21■□□□□ 0.19
USP39-218ENST00000493829 TRAV38-1A0A0B4J264 116 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 SH2D1BO14796 132 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 DEGS1O15121 323 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 IGHV2-70P01814 119 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 TALDO1P37837 337 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 GPR6P46095 362 aaPredicted RBP16.21■□□□□ 0.18
USP39-218ENST00000493829 ZNF146Q15072 292 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 TMEM69Q5SWH9 247 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 SIGIRRQ6IA17 410 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 FAM216BQ8N7L0 139 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 OR10R2Q8NGX6 335 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 RAB40AQ8WXH6 277 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 BEX4Q9NWD9 120 aaPredicted RBP16.21■□□□□ 0.18
USP39-218ENST00000493829 GLS2Q9UI32 602 aa16.21■□□□□ 0.18
USP39-218ENST00000493829 MRPS7Q9Y2R9 242 aaKnown RBP16.21■□□□□ 0.18
USP39-218ENST00000493829 RAB27BO00194 218 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 PTHLHP12272 177 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 SELLP14151 372 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 MUC1P15941 1255 aaPredicted RBP16.2■□□□□ 0.18
USP39-218ENST00000493829 PRDX2P32119 198 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 PDLIM4P50479 330 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 COL10A1Q03692 680 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 MPV17LQ2QL34 196 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 Q6P435 159 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 C6orf201Q7Z4U5 140 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 BPIFB2Q8N4F0 458 aa16.2■□□□□ 0.18
USP39-218ENST00000493829 ASCC1Q8N9N2 400 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms