RNA–Protein interactions for RNA: ENST00000488146.5

DEPDC1-203, Transcript of DEP domain containing 1, humanhuman

TSL 2

Gene DEPDC1, Length 2,658 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-203ENST00000488146 RANGRFQ9HD47 186 aaPredicted RBP2.16□□□□□ -2.06
DEPDC1-203ENST00000488146 C1orf123Q9NWV4 160 aa2.16□□□□□ -2.06
DEPDC1-203ENST00000488146 IL20Q9NYY1 176 aa2.16□□□□□ -2.06
DEPDC1-203ENST00000488146 RHCGQ9UBD6 479 aa2.16□□□□□ -2.06
DEPDC1-203ENST00000488146 NUFIP1Q9UHK0 495 aaKnown RBP2.16□□□□□ -2.06
DEPDC1-203ENST00000488146 PYCARDQ9ULZ3 195 aa2.16□□□□□ -2.06
DEPDC1-203ENST00000488146 MXRA5Q9NR99 2828 aa2.16□□□□□ -2.06
DEPDC1-203ENST00000488146 ZNF469Q96JG9 3925 aaPredicted RBP2.16□□□□□ -2.06
DEPDC1-203ENST00000488146 KRTAP23-1A1A580 65 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 ANKRD61A6NGH8 418 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 GAGE10A6NGK3 116 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 GGT3PA6NGU5 568 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 LYNX1G3V0Z9 82 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 M0QX08 132 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 ITM2AO43736 263 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 LANCL1O43813 399 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 IGHG4P01861 327 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 FAM106CPP0CH98 169 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 LYNX1P0DP58 116 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 EGR2P11161 476 aaPredicted RBP2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 IFI30P13284 250 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 ZNF823P16415 610 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 ANXA7P20073 488 aaKnown RBP2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 PRKACBP22694 351 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 DUSP1P28562 367 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 MDH1P40925 334 aaKnown RBP2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 CAMPP49913 170 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 FAM3AP98173 230 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 CD47Q08722 323 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 MSMO1Q15800 293 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 FAM189A2Q15884 450 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 TMEM41BQ5BJD5 291 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 CLVS2Q5SYC1 327 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 GLYATL3Q5SZD4 288 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 C9orf135Q5VTT2 229 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 CD200R1LQ6Q8B3 271 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 HEPN1Q6WQI6 88 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 Q6ZNX1 250 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 LINC00336Q6ZUF6 198 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 TRPM8Q7Z2W7 1104 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 FOXRED2Q8IWF2 684 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 SGPP2Q8IWX5 399 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 OR5T2Q8NGG2 359 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 OR52L1Q8NGH7 329 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 OR51G2Q8NGK0 314 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 OR4Q3Q8NH05 313 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 AKR7LQ8NHP1 331 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 SLC26A7Q8TE54 656 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 LHX4Q969G2 390 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 EME1Q96AY2 570 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 TEX37Q96LM6 180 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 UBE2E2Q96LR5 201 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 SSX3Q99909 188 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 UQCC2Q9BRT2 126 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 ALG8Q9BVK2 526 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 CLEC7AQ9BXN2 247 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 NUAK2Q9H093 628 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 CMC2Q9NRP2 79 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 OR6C3Q9NZP0 311 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 VAPAQ9P0L0 249 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 KIAA1456Q9P272 454 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 DPM3Q9P2X0 92 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 TMCC3Q9ULS5 477 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 GAB2Q9UQC2 676 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 SPG11Q96JI7 2443 aa2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 SETD2Q9BYW2 2564 aaPredicted RBP2.15□□□□□ -2.06
DEPDC1-203ENST00000488146 FREM1Q5H8C1 2179 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 RP1L1Q8IWN7 2480 aaPredicted RBP2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 CCDC168Q8NDH2 2452 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 ABCA1O95477 2261 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 A0A087WUU8 490 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 MSGN1A6NI15 193 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 G3V4G9 280 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 FXYD1O00168 92 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 BHLHE40O14503 412 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 ARPC2O15144 300 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 TPST1O60507 370 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 CCDC22O60826 627 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 SULT1C4O75897 302 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 IGLV1-47P01700 117 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 SHBGP04278 402 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 HNRNPCP07910 306 aaKnown RBP eCLIP2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 OR8U9P0C7N5 309 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 ZNF728P0DKX0 622 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 CRYBA2P53672 197 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 OR12D2P58182 307 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 ERVS71-1P61550 626 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 SNAPC1Q16533 368 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 SLC25A30Q5SVS4 291 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 TPTE2P1Q5T6R2 138 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 CARD17Q5XLA6 110 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 SLC35E4Q6ICL7 350 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 KCTD18Q6PI47 426 aaPredicted RBP2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 ASCL4Q6XD76 172 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 MKXQ8IYA7 352 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 GAPTQ8N292 157 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 FANK1Q8TC84 345 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 LRRC29Q8WV35 223 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 CAPSLQ8WWF8 208 aa2.15□□□□□ -2.07
DEPDC1-203ENST00000488146 AQP3Q92482 292 aa2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms