RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 PPP1R8Q12972 351 aaKnown RBP12.71□□□□□ -0.37
DDX56-210ENST00000479440 CD300LDQ6UXZ3 194 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 TRMT10AQ8TBZ6 339 aaKnown RBP12.71□□□□□ -0.37
DDX56-210ENST00000479440 EMG1Q92979 244 aaKnown RBP12.71□□□□□ -0.37
DDX56-210ENST00000479440 SLAMF9Q96A28 289 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 RAX2Q96IS3 184 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 NOL4LQ96MY1 436 aaPredicted RBP12.71□□□□□ -0.37
DDX56-210ENST00000479440 DUX3Q96PT4 197 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 CDRT15Q96T59 188 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 MYLK2Q9H1R3 596 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 PCDHB16Q9NRJ7 776 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 SLC7A11Q9UPY5 501 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 SAMHD1Q9Y3Z3 626 aaKnown RBP12.71□□□□□ -0.37
DDX56-210ENST00000479440 TMEM14AQ9Y6G1 99 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 V9GYS6 101 aa12.71□□□□□ -0.37
DDX56-210ENST00000479440 FAM230AA0A1W2PPH8 454 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 BUB1B-PAK6H3BSN5 160 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 IGHA1P01876 353 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 CDK2P24941 298 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 ERP29P30040 261 aaKnown RBP12.7□□□□□ -0.38
DDX56-210ENST00000479440 MFGE8Q08431 387 aaPredicted RBP12.7□□□□□ -0.38
DDX56-210ENST00000479440 HEPN1Q6WQI6 88 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 FOXRED2Q8IWF2 684 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 Q8IYB0 196 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 ZNF679Q8IYX0 411 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 OR10G2Q8NGC3 310 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 ASB17Q8WXJ9 295 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 NIPSNAP1Q9BPW8 284 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 PLEKHA1Q9HB21 404 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 SEBOXQ9HB31 216 aaPredicted RBP12.7□□□□□ -0.38
DDX56-210ENST00000479440 IKZF2Q9UKS7 526 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 ZNF256Q9Y2P7 627 aaPredicted RBP12.7□□□□□ -0.38
DDX56-210ENST00000479440 SMAD5-AS1Q9Y6J3 95 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 U3KQV3 271 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 DNAH7Q8WXX0 4024 aa12.7□□□□□ -0.38
DDX56-210ENST00000479440 FAM172BPA6NC97 362 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 SEC14L6B5MCN3 397 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 LOC110117498-PIK3R3F6TDL0 507 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 FGF16O43320 207 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 ROM1Q03395 351 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 ZNF91Q05481 1191 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 RBM39Q14498 530 aaKnown RBP12.69□□□□□ -0.38
DDX56-210ENST00000479440 BCL2L15Q5TBC7 163 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 BAIAP2L2Q6UXY1 529 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 SLC35E3Q7Z769 313 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 EGFL6Q8IUX8 553 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 PGAM4Q8N0Y7 254 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 C5orf56Q8N8D9 126 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 OR52N4Q8NGI2 321 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 OR14K1Q8NGZ2 314 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 CADM1Q9BY67 442 aaKnown RBP12.69□□□□□ -0.38
DDX56-210ENST00000479440 ZNF286AQ9HBT8 521 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 TAS2R3Q9NYW6 316 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 MTCH1Q9NZJ7 389 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 SIRT4Q9Y6E7 314 aaPredicted RBP12.69□□□□□ -0.38
DDX56-210ENST00000479440 HUWE1Q7Z6Z7 4374 aaKnown RBP12.69□□□□□ -0.38
DDX56-210ENST00000479440 DSCAML1Q8TD84 2053 aa12.69□□□□□ -0.38
DDX56-210ENST00000479440 DNAH1Q9P2D7 4330 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 FUOMA2VDF0 154 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 F8VVB4 439 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 F8VWA3 439 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 PSPNO60542 156 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 LY86O95711 162 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 SNRNP70P08621 437 aaKnown RBP12.68□□□□□ -0.38
DDX56-210ENST00000479440 PRRX1P54821 245 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 GK3PQ14409 553 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 OR2T5Q6IEZ7 315 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 TEX38Q6PEX7 206 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 THNSL2Q86YJ6 484 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 CPOQ8IVL8 374 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 STPG2Q8N412 459 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 OR2T29Q8NH02 315 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 TOMM40LQ969M1 308 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 RPEQ96AT9 228 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 TTTY10Q9BZA0 68 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 CCDC134Q9H6E4 229 aa12.68□□□□□ -0.38
DDX56-210ENST00000479440 AMMECR1Q9Y4X0 333 aaPredicted RBP12.68□□□□□ -0.38
DDX56-210ENST00000479440 A6NIN4 97 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 GATBO75879 557 aaKnown RBP12.67□□□□□ -0.38
DDX56-210ENST00000479440 HMGN1P05114 100 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 MRPL3P09001 348 aaKnown RBP12.67□□□□□ -0.38
DDX56-210ENST00000479440 TMEM11P17152 192 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 PTGFRP43088 359 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 OR3A1P47881 315 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 HCCSP53701 268 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 CDC42P60953 191 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 APOFQ13790 326 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 HES1Q14469 280 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 KPNB1Q14974 876 aaKnown RBP12.67□□□□□ -0.38
DDX56-210ENST00000479440 SLC25A26Q70HW3 274 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 MEPCEQ7L2J0 689 aaKnown RBP12.67□□□□□ -0.38
DDX56-210ENST00000479440 BBS1Q8NFJ9 593 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 OR4D6Q8NGJ1 314 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 MAGIXQ9H6Y5 334 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 GAR1Q9NY12 217 aaKnown RBP12.67□□□□□ -0.38
DDX56-210ENST00000479440 LINC00527Q9UJ94 153 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 TENM2Q9NT68 2774 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 STAB2Q8WWQ8 2551 aa12.67□□□□□ -0.38
DDX56-210ENST00000479440 FAM90A18PA6NE21 464 aa12.66□□□□□ -0.38
DDX56-210ENST00000479440 FAM90A16PA6NEW6 464 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms