RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 RILPQ96NA2 401 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 FAAP24Q9BTP7 215 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 EMC6Q9BV81 110 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 METTL9Q9H1A3 318 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 ASB8Q9H765 288 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 METTL17Q9H7H0 456 aaPredicted RBP3.06□□□□□ -1.92
VPS13D-207ENST00000476169 TRIM45Q9H8W5 580 aaPredicted RBP3.06□□□□□ -1.92
VPS13D-207ENST00000476169 HRASLSQ9HDD0 168 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 RBFOX1Q9NWB1 397 aaKnown RBP3.06□□□□□ -1.92
VPS13D-207ENST00000476169 NUFIP1Q9UHK0 495 aaKnown RBP3.06□□□□□ -1.92
VPS13D-207ENST00000476169 ATPIF1Q9UII2 106 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 PSG8Q9UQ74 426 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 TP53TG5Q9Y2B4 290 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 SNX10Q9Y5X0 201 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 ENPP4Q9Y6X5 453 aa3.06□□□□□ -1.92
VPS13D-207ENST00000476169 HCFC1P51610 2035 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 RALGAPA1Q6GYQ0 2036 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 CACNA1FO60840 1977 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 MTCL1Q9Y4B5 1905 aaKnown RBP3.05□□□□□ -1.92
VPS13D-207ENST00000476169 NSD3Q9BZ95 1437 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 ANKRD36BQ8N2N9 1353 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 PALLDQ8WX93 1383 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 TTC21AQ8NDW8 1320 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 F5H5K5 113 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 BIRC5O15392 142 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 MAGEB4O15481 346 aaPredicted RBP3.05□□□□□ -1.92
VPS13D-207ENST00000476169 TGOLN2O43493 480 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 ASS1P00966 412 aaKnown RBP3.05□□□□□ -1.92
VPS13D-207ENST00000476169 TYMSP04818 313 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 IFNA6P05013 189 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 IGKV5-2P06315 115 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 ATF1P18846 271 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 CXCR1P25024 350 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 VEGFCP49767 419 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 PPOXP50336 477 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 RAP1GDS1P52306 607 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 AP2S1P53680 142 aaPredicted RBP3.05□□□□□ -1.92
VPS13D-207ENST00000476169 RAB25P57735 213 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 RPL23P62829 140 aaKnown RBP3.05□□□□□ -1.92
VPS13D-207ENST00000476169 MGAT3Q09327 533 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 HERPUD1Q15011 391 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 SNRNP35Q16560 246 aaKnown RBP3.05□□□□□ -1.92
VPS13D-207ENST00000476169 C6orf99Q4VX62 202 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 TMEM236Q5W0B7 351 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 TTC33Q6PID6 262 aaPredicted RBP3.05□□□□□ -1.92
VPS13D-207ENST00000476169 DNM1P34Q6PK57 102 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 CLEC19AQ6UXS0 136 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 C10orf67Q8IYJ2 551 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 ZFP82Q8N141 532 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 C20orf203Q8NBC4 194 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 ACBD4Q8NC06 268 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 MAPK1IP1LQ8NDC0 245 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 OR5D18Q8NGL1 313 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 PIGXQ8TBF5 258 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 BLOC1S5Q8TDH9 187 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 PTH2Q96A98 100 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 TESCQ96BS2 214 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 SMIM19Q96E16 107 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 C16orf74Q96GX8 76 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 MAGEB18Q96M61 343 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 QKIQ96PU8 341 aaKnown RBP eCLIP3.05□□□□□ -1.926e-8■■■■■ 52.3
VPS13D-207ENST00000476169 ATOH8Q96SQ7 321 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 TIMM17AQ99595 171 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 PITX2Q99697 317 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 HSD17B10Q99714 261 aaKnown RBP3.05□□□□□ -1.92
VPS13D-207ENST00000476169 SELENOSQ9BQE4 189 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 TMEM243Q9BU79 118 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 KRTAP9-8Q9BYQ0 159 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 TOLLIPQ9H0E2 274 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 FBXO6Q9NRD1 293 aaPredicted RBP3.05□□□□□ -1.92
VPS13D-207ENST00000476169 HEBP1Q9NRV9 189 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 IL17CQ9P0M4 197 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 GUCA1BQ9UMX6 200 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 SIGLEC7Q9Y286 467 aa3.05□□□□□ -1.92
VPS13D-207ENST00000476169 COL5A2P05997 1499 aaPredicted RBP3.04□□□□□ -1.92
VPS13D-207ENST00000476169 CDK12Q9NYV4 1490 aaPredicted RBP3.04□□□□□ -1.92
VPS13D-207ENST00000476169 DISP2A7MBM2 1401 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 IGKV1-8A0A0C4DH67 115 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 TINCRA0A1B0GVN0 87 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 SRRM5B3KS81 715 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 NDUFC2-KCTD14E9PQ53 114 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 MANBAO00462 879 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 NPIPB7O75200 414 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 UGT2B11O75310 529 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 SOX14O95416 240 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 CTDNEP1O95476 244 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 TSPOP30536 169 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 RCVRNP35243 200 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 SSTR5P35346 364 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 GCLMP48507 274 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 CCL23P55773 120 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 DYNLL1P63167 89 aaKnown RBP3.04□□□□□ -1.92
VPS13D-207ENST00000476169 HBG1P69891 147 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 HBG2P69892 147 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 ARG2P78540 354 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 PRDX1Q06830 199 aaKnown RBP3.04□□□□□ -1.92
VPS13D-207ENST00000476169 ADIGQ0VDE8 80 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 HLA-DRB5Q30154 266 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 FAM173BQ6P4H8 233 aa3.04□□□□□ -1.92
VPS13D-207ENST00000476169 XKRXQ6PP77 449 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms