RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 POM121Q96HA1 1249 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 GAFA1Q96PS6 74 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 CCL13Q99616 98 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 CST11Q9H112 138 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 CTSZQ9UBR2 303 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 STEAP1Q9UHE8 339 aa13.33□□□□□ -0.28
GPC1-207ENST00000466624 IL1AP01583 271 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 CHRM2P08172 466 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 GTF2F2P13984 249 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 CD99P14209 185 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 SERPINA2P20848 420 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 PITPNBP48739 271 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 OR10A3P58181 314 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 CTF1Q16619 201 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 SLC22A6Q4U2R8 563 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 ESCO2Q56NI9 601 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 ZNF841Q6ZN19 808 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 CD177Q8N6Q3 437 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 OR10K1Q8NGX5 313 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 IL36RNQ9UBH0 155 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 FBLN5Q9UBX5 448 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 OR14J1Q9UGF5 321 aa13.32□□□□□ -0.28
GPC1-207ENST00000466624 POLR3KQ9Y2Y1 108 aaPredicted RBP13.32□□□□□ -0.28
GPC1-207ENST00000466624 B4DSR2 109 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 FAM157AC9JC47 383 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 SH2D1BO14796 132 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 GPR37O15354 613 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 FOXH1O75593 365 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 HAND1O96004 215 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 INHBBP09529 407 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 IGHV4-31P0DP07 118 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 VSIG8P0DPA2 414 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 ARSBP15848 533 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 LMO1P25800 156 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 GABRA2P47869 451 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 TMBIM6P55061 237 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 RBM11P57052 281 aaKnown RBP13.31□□□□□ -0.28
GPC1-207ENST00000466624 LSM3P62310 102 aaKnown RBP13.31□□□□□ -0.28
GPC1-207ENST00000466624 WDR25Q64LD2 544 aaPredicted RBP13.31□□□□□ -0.28
GPC1-207ENST00000466624 SFXN4Q6P4A7 337 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 OR2W3Q7Z3T1 314 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 CROCCP3Q8IVE0 287 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 FAM216BQ8N7L0 139 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 CHST4Q8NCG5 386 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 MAPK1IP1LQ8NDC0 245 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 KCNG3Q8TAE7 436 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 RAB2BQ8WUD1 216 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 SSBP3Q9BWW4 388 aaPredicted RBP13.31□□□□□ -0.28
GPC1-207ENST00000466624 NAA50Q9GZZ1 169 aaKnown RBP13.31□□□□□ -0.28
GPC1-207ENST00000466624 FAM234AQ9H0X4 552 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 IFT22Q9H7X7 185 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 CLN8Q9UBY8 286 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 MAB21L2Q9Y586 359 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 MALRD1Q5VYJ5 2156 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 MED13LQ71F56 2210 aa13.31□□□□□ -0.28
GPC1-207ENST00000466624 A0A1W2PP11 408 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A10PA6NDY2 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A18PA6NE21 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A16PA6NEW6 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A20PA6NIJ5 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A8PA6NJQ4 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A7PA6NKC0 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A22PA8MWA6 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 TMEM14DPA8MWL7 114 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A12PA8MX19 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A5PA8MXJ8 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A23PA8MXZ1 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 DVL1O14640 695 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 SMAD7O15105 426 aaKnown RBP13.3□□□□□ -0.28
GPC1-207ENST00000466624 NDUFB3O43676 98 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A15PP0C7V4 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A13PP0C7W8 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A14PP0C7W9 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM90A24PP0C7X0 464 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 MGMTP16455 207 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 TGFBR1P36897 503 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 CAV3P56539 151 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 SEC61A1P61619 476 aaKnown RBP13.3□□□□□ -0.28
GPC1-207ENST00000466624 VBP1P61758 197 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 NCS1P62166 190 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 GNB2P62879 340 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 QRFPP83859 136 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 MPV17LQ2QL34 196 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 LRRC10Q5BKY1 277 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 HES5Q5TA89 166 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 Q6P435 159 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 CLVS1Q8IUQ0 354 aaPredicted RBP13.3□□□□□ -0.28
GPC1-207ENST00000466624 LINC01356Q8N9X3 169 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 FAM3DQ96BQ1 224 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 ST3GAL6Q9Y274 331 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 CELSR1Q9NYQ6 3014 aa13.3□□□□□ -0.28
GPC1-207ENST00000466624 ACANP16112 2415 aa13.29□□□□□ -0.28
GPC1-207ENST00000466624 PPIAL4CA0A0B4J2A2 164 aa13.29□□□□□ -0.28
GPC1-207ENST00000466624 A0A1B0GW55 424 aa13.29□□□□□ -0.28
GPC1-207ENST00000466624 KIAA1324LA8MWY0 1029 aaPredicted RBP13.29□□□□□ -0.28
GPC1-207ENST00000466624 H3BUI4 141 aa13.29□□□□□ -0.28
GPC1-207ENST00000466624 LDLRAD4O15165 306 aa13.29□□□□□ -0.28
GPC1-207ENST00000466624 ZNF737O75373 536 aa13.29□□□□□ -0.28
GPC1-207ENST00000466624 CRTAPO75718 401 aaPredicted RBP13.29□□□□□ -0.28
GPC1-207ENST00000466624 ECDO95905 644 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms