RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 Q8IYB0 196 aa13.76□□□□□ -0.21
HMGN1-209ENST00000463631 ENTHD1Q8IYW4 607 aa13.76□□□□□ -0.21
HMGN1-209ENST00000463631 OSR2Q8N2R0 312 aa13.76□□□□□ -0.21
HMGN1-209ENST00000463631 TPRX1Q8N7U7 411 aa13.76□□□□□ -0.21
HMGN1-209ENST00000463631 OR52N4Q8NGI2 321 aa13.76□□□□□ -0.21
HMGN1-209ENST00000463631 TRMT10AQ8TBZ6 339 aaKnown RBP13.76□□□□□ -0.21
HMGN1-209ENST00000463631 ZNF596Q8TC21 504 aa13.76□□□□□ -0.21
HMGN1-209ENST00000463631 SLAMF9Q96A28 289 aa13.76□□□□□ -0.21
HMGN1-209ENST00000463631 PLEKHA1Q9HB21 404 aa13.76□□□□□ -0.21
HMGN1-209ENST00000463631 UBE2J1Q9Y385 318 aaPredicted RBP13.76□□□□□ -0.21
HMGN1-209ENST00000463631 FAM230AA0A1W2PPH8 454 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 A6NIN4 97 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 B2RBV5 119 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 MGST3O14880 152 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 PSPNO60542 156 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 GATBO75879 557 aaKnown RBP13.75□□□□□ -0.21
HMGN1-209ENST00000463631 MMP23AO75900 390 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 IGHA1P01876 353 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 CD34P28906 385 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 P2RX3P56373 397 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 KHDC1LQ5JSQ8 128 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 HEPN1Q6WQI6 88 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 SLC25A26Q70HW3 274 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 HS3ST5Q8IZT8 346 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 OR51D1Q8NGF3 324 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 DNAJC9Q8WXX5 260 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 APOL4Q9BPW4 351 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 MCRIP2Q9BUT9 160 aaKnown RBP13.75□□□□□ -0.21
HMGN1-209ENST00000463631 CHST5Q9GZS9 411 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 HHLA2Q9UM44 414 aa13.75□□□□□ -0.21
HMGN1-209ENST00000463631 LEUTXA8MZ59 168 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 GNGT2O14610 69 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 GABRR1P24046 479 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 CD24P25063 80 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 SLC6A1P30531 599 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 OR3A1P47881 315 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 FUT6P51993 359 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 ZNF146Q15072 292 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 UBE2V2Q15819 145 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 SPIN3Q5JUX0 258 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 PLEKHG7Q6ZR37 379 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 EGFL6Q8IUX8 553 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 SLC35F2Q8IXU6 374 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 ABHD12Q8N2K0 398 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 EMG1Q92979 244 aaKnown RBP13.74□□□□□ -0.21
HMGN1-209ENST00000463631 CREB3L1Q96BA8 519 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 LRGUKQ96M69 825 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 CHST6Q9GZX3 395 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 GAL3ST2Q9H3Q3 398 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 ADGRL4Q9HBW9 690 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 TVP23BQ9NYZ1 205 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 IL36RNQ9UBH0 155 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 MRM2Q9UI43 246 aaKnown RBP13.74□□□□□ -0.21
HMGN1-209ENST00000463631 PCDHGB5Q9Y5G0 923 aa13.74□□□□□ -0.21
HMGN1-209ENST00000463631 TRBV2A0A0J9YWF9 115 aa13.73□□□□□ -0.21
HMGN1-209ENST00000463631 MAGEB4O15481 346 aaPredicted RBP13.73□□□□□ -0.21
HMGN1-209ENST00000463631 CEACAM3P40198 252 aa13.73□□□□□ -0.21
HMGN1-209ENST00000463631 THBS3P49746 956 aa13.73□□□□□ -0.21
HMGN1-209ENST00000463631 CDC42P60953 191 aa13.73□□□□□ -0.21
HMGN1-209ENST00000463631 TRAPPC6BQ86SZ2 158 aa13.73□□□□□ -0.21
HMGN1-209ENST00000463631 CCDC54Q8NEL0 328 aa13.73□□□□□ -0.21
HMGN1-209ENST00000463631 STMN2Q93045 179 aa13.73□□□□□ -0.21
HMGN1-209ENST00000463631 CCDC124Q96CT7 223 aaKnown RBP13.73□□□□□ -0.21
HMGN1-209ENST00000463631 CLN6Q9NWW5 311 aa13.73□□□□□ -0.21
HMGN1-209ENST00000463631 KIAA2026Q5HYC2 2103 aa13.73□□□□□ -0.21
HMGN1-209ENST00000463631 PSMB11A5LHX3 300 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 AQP12BA6NM10 295 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 OOSP1A8MZH6 123 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 ZNF670-ZNF695F2Z2N8 137 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 PRKYO43930 277 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 PRKACGP22612 351 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 CRISP1P54107 249 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 RPL23AP62750 156 aaKnown RBP13.72□□□□□ -0.21
HMGN1-209ENST00000463631 HLA-DRB5Q30154 266 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 PRAMEF5Q5TYX0 476 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 MEPCEQ7L2J0 689 aaKnown RBP13.72□□□□□ -0.21
HMGN1-209ENST00000463631 CATSPERDQ86XM0 798 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 AQP12AQ8IXF9 295 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 DNAAF1Q8NEP3 725 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 CANT1Q8WVQ1 401 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 CORO2AQ92828 525 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 C10orf35Q96D05 121 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 BORCS8Q96FH0 119 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 PRRG3Q9BZD7 231 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 PAPOLBQ9NRJ5 636 aaKnown RBP13.72□□□□□ -0.21
HMGN1-209ENST00000463631 RBFOX1Q9NWB1 397 aaKnown RBP13.72□□□□□ -0.21
HMGN1-209ENST00000463631 TAS2R3Q9NYW6 316 aa13.72□□□□□ -0.21
HMGN1-209ENST00000463631 ZMAT5Q9UDW3 170 aaKnown RBP13.72□□□□□ -0.21
HMGN1-209ENST00000463631 A0A087X0M5 115 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 TRGV10A0A0A0MS01 117 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 A0A1B0GX30 115 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 LY6LH3BQJ8 138 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 SYT7O43581 403 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 ENTPD6O75354 484 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 NHLRC4P0CG21 123 aaPredicted RBP13.71□□□□□ -0.21
HMGN1-209ENST00000463631 CDK2P24941 298 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 TPTE2P1Q5T6R2 138 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 AADACL4Q5VUY2 407 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 NXNL2Q5VZ03 156 aa13.71□□□□□ -0.21
HMGN1-209ENST00000463631 CCDC144NLQ6NUI1 221 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms