RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 TRAV1-1A0A0B4J248 108 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 CDC14CA4D256 554 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 NPIPB13A6NJU9 1138 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 NPIPB4C9JG80 1138 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 APODP05090 189 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 ZNF17P17021 662 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 CCL1P22362 96 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 BRS3P32247 399 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 COL10A1Q03692 680 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 ZP4Q12836 540 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 GPM6BQ13491 265 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 SSX7Q7RTT5 188 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 LGI3Q8N145 548 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 RTN4IP1Q8WWV3 396 aaPredicted RBP12.33□□□□□ -0.44
TOP3B-214ENST00000457270 C11orf40Q8WZ69 217 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 EXTL1Q92935 676 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 TMEM18Q96B42 140 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 MSI2Q96DH6 328 aaKnown RBP12.33□□□□□ -0.44
TOP3B-214ENST00000457270 HIST1H2AAQ96QV6 131 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 CHST11Q9NPF2 352 aa12.33□□□□□ -0.44
TOP3B-214ENST00000457270 DBHP09172 617 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 CEACAM1P13688 526 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 DAP3P51398 398 aaKnown RBP12.32□□□□□ -0.44
TOP3B-214ENST00000457270 LRP11Q86VZ4 500 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 HAS2Q92819 552 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 ADOQ96SZ5 270 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 CABLES2Q9BTV7 478 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 ANXA10Q9UJ72 324 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 KIR2DL5BA0A0G2JN68 375 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 KIR2DL5BA0A0G2JPC4 375 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 TCRBV21S2A2A0A5A6 115 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 FRG2CA6NGY1 282 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 AHSA1O95433 338 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 CTSBP07858 339 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 ZFP36L1Q07352 338 aaKnown RBP12.32□□□□□ -0.44
TOP3B-214ENST00000457270 ABHD12BQ7Z5M8 362 aaPredicted RBP12.32□□□□□ -0.44
TOP3B-214ENST00000457270 MRPL52Q86TS9 123 aaKnown RBP12.32□□□□□ -0.44
TOP3B-214ENST00000457270 KIR2DL5AQ8N109 375 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 OR1N1Q8NGS0 311 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 ACY3Q96HD9 319 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 PYGO2Q9BRQ0 406 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 VN1R1Q9GZP7 353 aa12.32□□□□□ -0.44
TOP3B-214ENST00000457270 MCTS1Q9ULC4 181 aaKnown RBP12.32□□□□□ -0.44
TOP3B-214ENST00000457270 LTBP2Q14767 1821 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 IGKV1-9A0A0C4DH69 117 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 A0A1W2PQD3 144 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 METTL12A8MUP2 240 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 NPIPA5E9PKD4 350 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 MS4A18H0YCH9 400 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 ETV2O00321 342 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-214ENST00000457270 ZNF728P0DKX0 622 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 ASCL1P50553 236 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 SLC37A1P57057 533 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 CHD3Q12873 2000 aaKnown RBP12.31□□□□□ -0.44
TOP3B-214ENST00000457270 MS4A18Q3C1V0 323 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 ABCA11PQ4W5N1 156 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 C11orf42Q8N5U0 333 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 HLA-CQ95604 372 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 LIME1Q9H400 295 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 NPIPA1Q9UND3 350 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 POLR3KQ9Y2Y1 108 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-214ENST00000457270 IGSF23A1L1A6 192 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 B4E171 279 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 PLRG1O43660 514 aaKnown RBP12.31□□□□□ -0.44
TOP3B-214ENST00000457270 NUDT14O95848 222 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 ZNF880Q6PDB4 577 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 PSRC1Q6PGN9 363 aaPredicted RBP12.31□□□□□ -0.44
TOP3B-214ENST00000457270 REEP6Q96HR9 211 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 TPSD1Q9BZJ3 242 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 TBL1XR1Q9BZK7 514 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 NCOR1P1Q9H4R4 102 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 PLEKHF2Q9H8W4 249 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 SDF2L1Q9HCN8 221 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 HRASLS2Q9NWW9 162 aa12.31□□□□□ -0.44
TOP3B-214ENST00000457270 FAM24AA6NFZ4 105 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 KLF8O95600 359 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-214ENST00000457270 TM4SF4P48230 202 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 VAMP2P63027 116 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 PRTGQ2VWP7 1150 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 CRIP3Q6Q6R5 217 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 RD3Q7Z3Z2 195 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 TGIF2LYQ8IUE0 185 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 WDFY1Q8IWB7 410 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 SLC38A9Q8NBW4 561 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 OR8B12Q8NGG6 310 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 TMEM171Q8WVE6 324 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 CALHM2Q9HA72 323 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 FAM60AQ9NP50 221 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 CISD1Q9NZ45 108 aaKnown RBP12.3□□□□□ -0.44
TOP3B-214ENST00000457270 HNRNPA1P09651 372 aaKnown RBP eCLIP12.3□□□□□ -0.44
TOP3B-214ENST00000457270 CDKN1BP46527 198 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 ELLP55199 621 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-214ENST00000457270 OGFOD3Q6PK18 319 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 GRINAQ7Z429 371 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 C1QL2Q7Z5L3 287 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 SPRED2Q7Z698 418 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 COMMD2Q86X83 199 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 MAML2Q8IZL2 1156 aaPredicted RBP12.3□□□□□ -0.44
TOP3B-214ENST00000457270 OR14C36Q8NHC7 312 aa12.3□□□□□ -0.44
TOP3B-214ENST00000457270 ANGPTL4Q9BY76 406 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms