RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 LURAP1Q96LR2 239 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 COL5A1P20908 1838 aaPredicted RBP11.95□□□□□ -0.5
PTPRE-204ENST00000455661 A0A0U1RQV5 110 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 SHISA8B8ZZ34 492 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 E9PLN8 166 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 F5H5K5 113 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 TERTO14746 1132 aaKnown RBP11.95□□□□□ -0.5
PTPRE-204ENST00000455661 CDS2O95674 445 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 FOLR1P15328 257 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 CTSSP25774 331 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 NKX2-1P43699 371 aaPredicted RBP11.95□□□□□ -0.5
PTPRE-204ENST00000455661 FASLGP48023 281 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 ZNF41P51814 821 aaPredicted RBP11.95□□□□□ -0.5
PTPRE-204ENST00000455661 EFNA3P52797 238 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 SRPXP78539 464 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 CHAF1BQ13112 559 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 TAF9Q16594 264 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 TMEM240Q5SV17 173 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 MEX3BQ6ZN04 569 aaKnown RBP11.95□□□□□ -0.5
PTPRE-204ENST00000455661 SLC35G3Q8N808 338 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 OR6X1Q8NH79 312 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 ABHD5Q8WTS1 349 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 LRRC61Q9BV99 259 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 NKX2-4Q9H2Z4 354 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 FOXD3Q9UJU5 478 aaPredicted RBP11.95□□□□□ -0.5
PTPRE-204ENST00000455661 RFNGQ9Y644 331 aa11.95□□□□□ -0.5
PTPRE-204ENST00000455661 TDRD6O60522 2096 aaKnown RBP11.95□□□□□ -0.5
PTPRE-204ENST00000455661 TCRBV21S2A2A0A5A6 115 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 IGSF23A1L1A6 192 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 ZNF205O95201 554 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 IGLV3-1P01715 115 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 DBHP09172 617 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 OMGP23515 440 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 UCP3P55916 312 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 MTCP1P56278 107 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 RNF4P78317 190 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 FIP1L1Q6UN15 594 aaKnown RBP11.94□□□□□ -0.5
PTPRE-204ENST00000455661 BEND4Q6ZU67 534 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 ADPRHL1Q8NDY3 354 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 PHOSPHO2Q8TCD6 241 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 C10orf35Q96D05 121 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 SPIN2AQ99865 258 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 SPIN2BQ9BPZ2 258 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 C2orf88Q9BSF0 95 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 CHRNA10Q9GZZ6 450 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 DUSP15Q9H1R2 295 aaPredicted RBP11.94□□□□□ -0.5
PTPRE-204ENST00000455661 IGFLR1Q9H665 355 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 ADAMTS9Q9P2N4 1935 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 C5orf63A6NC05 138 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 LILRA5A6NI73 299 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 ZNF732B4DXR9 585 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 CLDN34H7C241 214 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 TLX3O43711 291 aaPredicted RBP11.94□□□□□ -0.5
PTPRE-204ENST00000455661 IGHV4-34P06331 123 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 FOSL2P15408 326 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 RAB4BP61018 213 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 HERV-K104P61576 105 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 TMEM92Q6UXU6 159 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 DPPA3Q6W0C5 159 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 CPEB2Q7Z5Q1 589 aaKnown RBP11.94□□□□□ -0.5
PTPRE-204ENST00000455661 DMRTC2Q8IXT2 367 aaPredicted RBP11.94□□□□□ -0.5
PTPRE-204ENST00000455661 CLDND2Q8NHS1 167 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 MRGPRX4Q96LA9 322 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 TMEM242Q9NWH2 141 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 DKKL1Q9UK85 242 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 PITPNC1Q9UKF7 332 aa11.94□□□□□ -0.5
PTPRE-204ENST00000455661 A0A087WZY1 265 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 MSTNO14793 375 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 TRAF3IP2O43734 574 aaPredicted RBP11.93□□□□□ -0.5
PTPRE-204ENST00000455661 IL2RGP31785 369 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 CD200P41217 278 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 ARL4DP49703 201 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 SPCS3P61009 180 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 PNRC1Q12796 327 aaPredicted RBP11.93□□□□□ -0.5
PTPRE-204ENST00000455661 C4orf17Q53FE4 359 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 C16orf47Q6ZP98 133 aaPredicted RBP11.93□□□□□ -0.5
PTPRE-204ENST00000455661 CMTM1Q8IZ96 169 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 TMEM252Q8N6L7 170 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 OR10G4Q8NGN3 311 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 OR5C1Q8NGR4 320 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 OR11L1Q8NGX0 322 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 MOB3AQ96BX8 217 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 ZNF286AQ9HBT8 521 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 LYRM2Q9NU23 88 aaPredicted RBP11.93□□□□□ -0.5
PTPRE-204ENST00000455661 CHD7Q9P2D1 2997 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 NKX2-6A6NCS4 301 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 TRDCB7Z8K6 153 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 MKRN2OSH3BPM6 223 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 ONECUT2O95948 504 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 FGF7P21781 194 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 CTHP32929 405 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 NOVA1P51513 510 aaKnown RBP11.93□□□□□ -0.5
PTPRE-204ENST00000455661 UNQ6494/PRO21346Q6UXR6 183 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 P4HA3Q7Z4N8 544 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 GJC3Q8NFK1 279 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 BADQ92934 168 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 KLHDC7BQ96G42 594 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 OXGR1Q96P68 337 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 HIST1H2BLQ99880 126 aa11.93□□□□□ -0.5
PTPRE-204ENST00000455661 C11orf1Q9H5F2 150 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms