RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 DNTTIP1Q9H147 329 aa3.8□□□□□ -1.8
GTF3C3-208ENST00000455546 MUC13Q9H3R2 512 aa3.8□□□□□ -1.8
GTF3C3-208ENST00000455546 METTL8Q9H825 291 aaKnown RBP3.8□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF556Q9HAH1 456 aa3.8□□□□□ -1.8
GTF3C3-208ENST00000455546 AKIP1Q9NQ31 210 aa3.8□□□□□ -1.8
GTF3C3-208ENST00000455546 OR14J1Q9UGF5 321 aa3.8□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF222Q9UK12 451 aa3.8□□□□□ -1.8
GTF3C3-208ENST00000455546 IKZF2Q9UKS7 526 aa3.8□□□□□ -1.8
GTF3C3-208ENST00000455546 SLC22A13Q9Y226 551 aa3.8□□□□□ -1.8
GTF3C3-208ENST00000455546 PKD1L1Q8TDX9 2849 aa3.8□□□□□ -1.8
GTF3C3-208ENST00000455546 CMYA5Q8N3K9 4069 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 A0A0U1RQV5 110 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 A0A1B0GTI1 187 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 ARRDC5A6NEK1 342 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 AQP12BA6NM10 295 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 DIRC3C9JPN6 131 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 F5H697 171 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 F8VVB4 439 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 F8VWA3 439 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 CHST1O43916 411 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 FKBP6O75344 327 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 SRSF10O75494 262 aaKnown RBP3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 MTRF1O75570 445 aaKnown RBP3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 IGLV3-1P01715 115 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 CALCBP10092 127 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 CD28P10747 220 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 ANXA8P13928 327 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 KIR2DS4P43632 304 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 RIDAP52758 137 aaKnown RBP3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 RPL31P62899 125 aaKnown RBP3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 DGCR2P98153 550 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 COL10A1Q03692 680 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 ACSM1Q08AH1 577 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 FLOT2Q14254 428 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF273Q14593 569 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 HERPUD1Q15011 391 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 SNCBQ16143 134 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 SSX2Q16385 188 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 LRRC75BQ2VPJ9 315 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 NSUN5P1Q3KNT7 163 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 LDLRAD2Q5SZI1 272 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF684Q5T5D7 378 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 NCR3LG1Q68D85 454 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 KCTD18Q6PI47 426 aaPredicted RBP3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 CRIP3Q6Q6R5 217 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF322Q6U7Q0 402 aaPredicted RBP3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 CCBE1Q6UXH8 406 aaPredicted RBP3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 Q6ZTK2 550 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 MEPCEQ7L2J0 689 aaKnown RBP3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 KRT74Q7RTS7 529 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 SSX6Q7RTT6 188 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 TMEM219Q86XT9 240 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 CALHM1Q8IU99 346 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 AQP12AQ8IXF9 295 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF679Q8IYX0 411 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 TPRX1Q8N7U7 411 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 TCEANCQ8N8B7 351 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 POC1AQ8NBT0 407 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 PAPD5Q8NDF8 572 aaKnown RBP3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 OR5D13Q8NGL4 314 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 OR5R1Q8NH85 324 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 SDSLQ96GA7 329 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 OR5M11Q96RB7 305 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 OR8B4Q96RC9 309 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 IL4I1Q96RQ9 567 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 YIPF3Q9GZM5 350 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 C1orf21Q9H246 121 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 SLC25A19Q9HC21 320 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 ABCB9Q9NP78 766 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 DNAJB9Q9UBS3 223 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 ENPP5Q9UJA9 477 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 NOTCH1P46531 2555 aa3.79□□□□□ -1.8
GTF3C3-208ENST00000455546 IGKV1-27A0A075B6S5 117 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 A0A0G2JK05 382 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 LOC102723971A0A1B0GUV8 181 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 FAM230AA0A1W2PPH8 454 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 TCRBV3S1A0A5B6 114 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 PQLC2LA1A4F0 135 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 ACOD1A6NK06 481 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 OR5B21A6NL26 309 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 LOC110117498-PIK3R3F6TDL0 507 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 SLC1A7O00341 560 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 GYG2O15488 501 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 RRP9O43818 475 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 ZNF254O75437 659 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 DHRS3O75911 302 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 NXPH2O95156 264 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 FAM107AO95990 144 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 TK1P04183 234 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 ARG1P05089 322 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 PGA5P0DJD9 388 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 BTF3P20290 206 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 DUSP1P28562 367 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 POLR2IP36954 125 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 EFNB2P52799 333 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 SNU13P55769 128 aaKnown RBP3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 DLX6P56179 175 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 EDDM3BP56851 147 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 LOXL3P58215 753 aa3.78□□□□□ -1.8
GTF3C3-208ENST00000455546 BLCAPP62952 87 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms