RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 FAHD2BQ6P2I3 314 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 TRIM40Q6P9F5 258 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 DHRS11Q6UWP2 260 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 CYHR1Q6ZMK1 362 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 SLC16A13Q7RTY0 426 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 DHDDSQ86SQ9 333 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 IFNEQ86WN2 208 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 C12orf45Q8N5I9 185 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZNF283Q8N7M2 679 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 FAM83FQ8NEG4 500 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR10G3Q8NGC4 313 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 TCTEX1D2Q8WW35 142 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 CKAP2Q8WWK9 683 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 RIT1Q92963 219 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 ISOC1Q96CN7 298 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 SMIM12Q96EX1 92 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 FAHD2AQ96GK7 314 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 PRRC1Q96M27 445 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 IL22Q9GZX6 179 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 FN3KQ9H479 309 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 ANKRD19PQ9H560 264 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 ELOVL6Q9H5J4 265 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 CCNB1IP1Q9NPC3 277 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 SAR1AQ9NR31 198 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 GSKIPQ9P0R6 139 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 CLCF1Q9UBD9 225 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 DUX4Q9UBX2 424 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 PRO0461Q9UI25 63 aa3.56□□□□□ -1.84
HMGB3P5-201ENST00000428894 HEATR1Q9H583 2144 aaKnown RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 A0A087WXM4 84 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 A0A0X1KG70 313 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 A0A1W2PPV4 95 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 C9orf170A2RU37 121 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 LRIT2A6NDA9 550 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 SLC22A20A6NK97 555 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 SIGLEC5O15389 551 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 GYG2O15488 501 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 DLEU1O43261 78 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ERI3O43414 337 aaKnown RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 KIAA0513O60268 411 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 TBX19O60806 448 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 VAPBO95292 243 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ETHE1O95571 254 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 IFNA7P01567 189 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 MT-ND1P03886 318 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 MT-ND2P03891 347 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 C2P06681 752 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 APRTP07741 180 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 SOD3P08294 240 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 CSF3P09919 207 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ACSM4P0C7M7 580 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZNF25P17030 456 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 BGNP21810 368 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 USF1P22415 310 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ME2P23368 584 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 CPT2P23786 658 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 GCAP28676 217 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 FMO3P31513 532 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 NAA10P41227 235 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ELK3P41970 407 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 LIM2P55344 173 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 MAGOHP61326 146 aaKnown RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 FGL1Q08830 312 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 PDIA2Q13087 525 aaKnown RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ATP6AP1Q15904 470 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZNF181Q2M3W8 571 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 FAM174BQ3ZCQ3 159 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 SPANXN2Q5MJ10 180 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 AGAP6Q5VW22 663 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 TRIQKQ629K1 86 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 PLCXD3Q63HM9 321 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 LPCAT3Q6P1A2 487 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 TFAP2EQ6VUC0 442 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 EIF3MQ7L2H7 374 aaKnown RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 SSX8Q7RTT4 187 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 LHFPL4Q7Z7J7 247 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 S100A7AQ86SG5 101 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 YRDCQ86U90 279 aaKnown RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ANGPTL5Q86XS5 388 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZNF573Q86YE8 665 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 KLHDC8AQ8IYD2 350 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 FAM58AQ8N1B3 248 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 LRRC18Q8N456 261 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR10H4Q8NGA5 316 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR8J1Q8NGP2 316 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR5J2Q8NH18 312 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 TRMT10AQ8TBZ6 339 aaKnown RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 ZFAND1Q8TCF1 268 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 RBPMSQ93062 196 aaKnown RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 NEIL2Q969S2 332 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 MAGOHBQ96A72 148 aaKnown RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 MRGPRFQ96AM1 343 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 C12orf43Q96C57 262 aaKnown RBP3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 MS4A6EQ96DS6 147 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 C14orf144Q96I85 54 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 SAMD8Q96LT4 415 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 PRRT1Q99946 306 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 APOL4Q9BPW4 351 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 VPS25Q9BRG1 176 aa3.55□□□□□ -1.84
HMGB3P5-201ENST00000428894 HINT2Q9BX68 163 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms