RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 SYT4Q9H2B2 425 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TXNIPQ9H3M7 391 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 SRD5A3Q9H8P0 318 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 PRMT8Q9NR22 394 aaPredicted RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 SOHLH2Q9NX45 425 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 RASL12Q9NYN1 266 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 PISDQ9UG56 409 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TCF19Q9Y242 345 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 VDAC3Q9Y277 283 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 MEMO1Q9Y316 297 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 MRPS2Q9Y399 296 aaKnown RBP4.29□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF175Q9Y473 711 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 R4GMQ9 66 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 FER1L5A0AVI2 2057 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 CACNA1CQ13936 2221 aa4.29□□□□□ -1.72
LINC00458-202ENST00000427299 TRAV8-7A0A075B6U6 113 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 TRAV18A0A075B6X5 111 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 A0A1B0GTI1 187 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 LOC107986453A0A1B0GWG9 222 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 C5orf51A6NDU8 294 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 OR2AT4A6NND4 320 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 MPTX1A8MV57 137 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 A8MVM7 634 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 C17orf105B2RV13 164 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 NPIPA5E9PKD4 350 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 K7EQS6 105 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 TOR1AO14656 332 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 SMPD2O60906 423 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 CDC123O75794 336 aaPredicted RBP4.28□□□□□ -1.72
LINC00458-202ENST00000427299 AKR7A3O95154 331 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 NUDT14O95848 222 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 HPP00738 406 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 RLN2P04090 185 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 CD3DP04234 171 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 IFNA6P05013 189 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 PROS1P07225 676 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 HEXBP07686 556 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF883P0CG24 379 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF823P16415 610 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 CNR1P21554 472 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 HSD11B1P28845 292 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 KIR3DL2P43630 455 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 CAMLGP49069 296 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 ARRB1P49407 418 aaPredicted RBP4.28□□□□□ -1.72
LINC00458-202ENST00000427299 UCP2P55851 309 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 H2BFSP57053 126 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 NAAAQ02083 359 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 DHRS2Q13268 280 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 EIF2B1Q14232 305 aaKnown RBP4.28□□□□□ -1.72
LINC00458-202ENST00000427299 NNATQ16517 81 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 DEFB110Q30KQ9 67 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 SCGB2B2Q4G0G5 96 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 NKAIN2Q5VXU1 208 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 FAM166AQ6J272 317 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 PLXDC2Q6UX71 529 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 TFAP2EQ6VUC0 442 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 IL34Q6ZMJ4 242 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 Q6ZSR6 202 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 TMED4Q7Z7H5 227 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF546Q86UE3 836 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 BPIFB2Q8N4F0 458 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 SLC22A24Q8N4F4 322 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 ARRDC1Q8N5I2 433 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 JAGN1Q8N5M9 183 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF615Q8N8J6 731 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 OR51D1Q8NGF3 324 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 OR52B4Q8NGK2 314 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF519Q8TB69 540 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 RNASE8Q8TDE3 154 aaKnown RBP4.28□□□□□ -1.72
LINC00458-202ENST00000427299 ST8SIA1Q92185 356 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 BADQ92934 168 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 CPNE2Q96FN4 548 aaPredicted RBP4.28□□□□□ -1.72
LINC00458-202ENST00000427299 SLC25A44Q96H78 314 aaPredicted RBP4.28□□□□□ -1.72
LINC00458-202ENST00000427299 NARS2Q96I59 477 aaKnown RBP4.28□□□□□ -1.72
LINC00458-202ENST00000427299 EDEM2Q9BV94 578 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 NUDT9Q9BW91 350 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 ZNF471Q9BX82 626 aaPredicted RBP4.28□□□□□ -1.72
LINC00458-202ENST00000427299 KRTAP4-3Q9BYR4 195 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 REG4Q9BYZ8 158 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 NMES1Q9C002 83 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 NKX6-2Q9C056 277 aaPredicted RBP4.28□□□□□ -1.72
LINC00458-202ENST00000427299 SHARPINQ9H0F6 387 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 ELOVL3Q9HB03 270 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 SLC39A1Q9NY26 324 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 RAB22AQ9UL26 194 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 NPIPA1Q9UND3 350 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 TNFSF18Q9UNG2 199 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 KLHDC2Q9Y2U9 406 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 RP1P56715 2156 aa4.28□□□□□ -1.72
LINC00458-202ENST00000427299 IGLV1-36A0A0B4J1U3 117 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 A0A0B4J2A0 478 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 SPTY2D1-AS1A0A0U1RR47 76 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 A0A1W2PNV4 684 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 TVP23AA6NH52 213 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 OR5H14A6NHG9 310 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 PRR32B1ATL7 298 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 IDSB3KWA1 339 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 ZNF878C9JN71 531 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 ATP6V1G2-DDX39BF2Z307 99 aa4.27□□□□□ -1.73
LINC00458-202ENST00000427299 H7C1C5 153 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms