RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 TMEM171Q8WVE6 324 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 RADILQ96JH8 1075 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 CHST6Q9GZX3 395 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 OR51J1Q9H342 316 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 IFT22Q9H7X7 185 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 IGLV3-9A0A075B6K5 115 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 THBDP07204 575 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 PPP3CBP16298 524 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 PTAFRP25105 342 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 TAS2R46P59540 309 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 LY6DQ14210 128 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 IL13RA2Q14627 380 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 FBXL19-AS1Q494R0 122 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 CD276Q5ZPR3 534 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 ALKBH2Q6NS38 261 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 TMEM108Q6UXF1 575 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 NUP37Q8NFH4 326 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 MRGPRFQ96AM1 343 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 NRIP2Q9BQI9 281 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 ST6GALNAC5Q9BVH7 336 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 CXXC4Q9H2H0 198 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 ZNF230Q9UIE0 474 aaPredicted RBP12.92□□□□□ -0.34
ACTB-204ENST00000425660 FZR1Q9UM11 496 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 EPG5Q9HCE0 2579 aa12.92□□□□□ -0.34
ACTB-204ENST00000425660 ATP6V1G2-DDX39BF2Z307 99 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 NOS1APO75052 506 aaPredicted RBP12.91□□□□□ -0.34
ACTB-204ENST00000425660 PGA5P0DJD9 388 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 ANXA7P20073 488 aaKnown RBP12.91□□□□□ -0.34
ACTB-204ENST00000425660 RPS23P62266 143 aaKnown RBP12.91□□□□□ -0.34
ACTB-204ENST00000425660 MAB21L1Q13394 359 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 IGFBP7Q16270 282 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 NKPD1Q17RQ9 610 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 SLC36A1Q7Z2H8 476 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 FAM58AQ8N1B3 248 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 BATF2Q8N1L9 274 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 OR5AP2Q8NGF4 316 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 CMSS1Q9BQ75 279 aaKnown RBP12.91□□□□□ -0.34
ACTB-204ENST00000425660 HDHD3Q9BSH5 251 aaPredicted RBP12.91□□□□□ -0.34
ACTB-204ENST00000425660 SPACA1Q9HBV2 294 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 MYOZ1Q9NP98 299 aaPredicted RBP12.91□□□□□ -0.34
ACTB-204ENST00000425660 IL36RNQ9UBH0 155 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 ZNF221Q9UK13 617 aa12.91□□□□□ -0.34
ACTB-204ENST00000425660 CEACAM18A8MTB9 384 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 SNRPGP15A8MWD9 76 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 CDIPTO14735 213 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 PMP2P02689 132 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 HPXP02790 462 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 IFNA6P05013 189 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 FCGR3AP08637 254 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 PRKACAP17612 351 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 AMY2BP19961 511 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 ASCL1P50553 236 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 ATAD3CQ5T2N8 411 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 OVCH2Q7RTZ1 564 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 ZNF488Q96MN9 340 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 C12orf4Q9NQ89 552 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 ZNF701Q9NV72 531 aaPredicted RBP12.9□□□□□ -0.34
ACTB-204ENST00000425660 PTBP3O95758 552 aaKnown RBP12.9□□□□□ -0.34
ACTB-204ENST00000425660 GLAP06280 429 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 KLF3P57682 345 aaPredicted RBP12.9□□□□□ -0.34
ACTB-204ENST00000425660 MRPS15P82914 257 aaKnown RBP12.9□□□□□ -0.34
ACTB-204ENST00000425660 CBX3Q13185 183 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 PDCD1Q15116 288 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 SCGB2B2Q4G0G5 96 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 BRICD5Q6PL45 260 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 C11orf53Q8IXP5 236 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 TCTE3Q8IZS6 198 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 ZDHHC22Q8N966 263 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 OR5H2Q8NGV7 314 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 GTF3AQ92664 365 aaKnown RBP12.9□□□□□ -0.34
ACTB-204ENST00000425660 BEX2Q9BXY8 128 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 MED28Q9H204 178 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 BEX1Q9HBH7 125 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 HES4Q9HCC6 221 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 MSL2Q9HCI7 577 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 ANXA10Q9UJ72 324 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 OSGIN2Q9Y236 505 aa12.9□□□□□ -0.34
ACTB-204ENST00000425660 SMG1Q96Q15 3661 aaKnown RBP12.89□□□□□ -0.35
ACTB-204ENST00000425660 TMEM82A0PJX8 343 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 F5H5P2 479 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 CCL21O00585 134 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 CSN2P05814 226 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 VSIG10L2P0DP72 767 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 CHRNB4P30926 498 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 MZT1Q08AG7 82 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 ZNF146Q15072 292 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 SRSF7Q16629 238 aaKnown RBP eCLIP12.89□□□□□ -0.35
ACTB-204ENST00000425660 ATPAF1Q5TC12 328 aaPredicted RBP12.89□□□□□ -0.35
ACTB-204ENST00000425660 ZNF626Q68DY1 528 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 LRP11Q86VZ4 500 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 LHFPL1Q86WI0 220 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 DRAXINQ8NBI3 349 aaPredicted RBP12.89□□□□□ -0.35
ACTB-204ENST00000425660 POC1AQ8NBT0 407 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 TERB2Q8NHR7 220 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 ZNF442Q9H7R0 627 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 GPN1Q9HCN4 374 aaPredicted RBP12.89□□□□□ -0.35
ACTB-204ENST00000425660 RANGRFQ9HD47 186 aaPredicted RBP12.89□□□□□ -0.35
ACTB-204ENST00000425660 KALRNO60229 2985 aa12.89□□□□□ -0.35
ACTB-204ENST00000425660 IGKV1D-8A0A087WSZ0 117 aa12.88□□□□□ -0.35
ACTB-204ENST00000425660 DPRXA6NFQ7 191 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms