RNA–Protein interactions for RNA: ENST00000413442.5

USP54-202, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 543 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-202ENST00000413442 RDH10Q8IZV5 341 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 STX19Q8N4C7 294 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 CD177Q8N6Q3 437 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 FAM216BQ8N7L0 139 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 SIGLECL1Q8N7X8 197 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 ZNF565Q8N9K5 539 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 ZNRF1Q8ND25 227 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 C19orf18Q8NEA5 215 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 TMEM185AQ8NFB2 350 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 OR10A7Q8NGE5 316 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 OR51T1Q8NGJ9 327 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 OR13D1Q8NGV5 346 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 APH1BQ8WW43 257 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 H1FXQ92522 213 aaKnown RBP5.26□□□□□ -1.57
USP54-202ENST00000413442 GGHQ92820 318 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 MALSU1Q96EH3 234 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 ADAT3Q96EY9 351 aaPredicted RBP5.26□□□□□ -1.57
USP54-202ENST00000413442 TBX15Q96SF7 602 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 S100A13Q99584 98 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 SLC6A7Q99884 636 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 TTTY10Q9BZA0 68 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 BARHL1Q9BZE3 327 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 FGF23Q9GZV9 251 aaPredicted RBP5.26□□□□□ -1.57
USP54-202ENST00000413442 GAL3ST2Q9H3Q3 398 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 PPP1R3EQ9H7J1 279 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 IFT22Q9H7X7 185 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 ISG20L2Q9H9L3 353 aaKnown RBP5.26□□□□□ -1.57
USP54-202ENST00000413442 SPACA1Q9HBV2 294 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 AMBNQ9NP70 447 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 IL36GQ9NZH8 169 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 TBL2Q9Y4P3 447 aaKnown RBP5.26□□□□□ -1.57
USP54-202ENST00000413442 LINC00312Q9Y6C7 94 aa5.26□□□□□ -1.57
USP54-202ENST00000413442 FBN1P35555 2871 aaKnown RBP5.26□□□□□ -1.57
USP54-202ENST00000413442 IGHV3OR15-7A0A075B7D8 119 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 IGKV1-9A0A0C4DH69 117 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A10PA6NDY2 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A18PA6NE21 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A16PA6NEW6 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A20PA6NIJ5 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A8PA6NJQ4 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A7PA6NKC0 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A22PA8MWA6 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A12PA8MX19 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A5PA8MXJ8 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A23PA8MXZ1 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 MYL12BO14950 172 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 NPFFO15130 113 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 ZNF737O75373 536 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 CA11O75493 328 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 NDUFA7O95182 113 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 APOL3O95236 402 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 HAND1O96004 215 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 PAHP00439 452 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 CSTBP04080 98 aaKnown RBP5.25□□□□□ -1.57
USP54-202ENST00000413442 HCKP08631 526 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A15PP0C7V4 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A13PP0C7W8 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A14PP0C7W9 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 FAM90A24PP0C7X0 464 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 ZNF728P0DKX0 622 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 IGHV4-38-2P0DP08 117 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 TMEM225BP0DP42 221 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 TGFBR2P37173 567 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 PTGFRP43088 359 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 IER3P46695 156 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 ETV1P50549 477 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 PSMD7P51665 324 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 ARHGDIBP52566 201 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 CAPZA1P52907 286 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 WNT4P56705 351 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 ACTG1P63261 375 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 DOC2BQ14184 412 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 IL13RA2Q14627 380 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 SLC9A3R2Q15599 337 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 ODF4Q2M2E3 257 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 C6orf141Q5SZD1 244 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 MINOS1Q5TGZ0 78 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 TMEM200BQ69YZ2 307 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 DMKNQ6E0U4 476 aaPredicted RBP5.25□□□□□ -1.57
USP54-202ENST00000413442 SHISA2Q6UWI4 295 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 VMO1Q7Z5L0 202 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 Q8N7P7 452 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 NANOGP1Q8N7R0 232 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 C3orf56Q8N813 242 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 ZNF485Q8NCK3 441 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 BEND2Q8NDZ0 799 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 OR11H6Q8NGC7 330 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 OR4F5Q8NH21 305 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 TRMT10AQ8TBZ6 339 aaKnown RBP5.25□□□□□ -1.57
USP54-202ENST00000413442 TSEN15Q8WW01 171 aaKnown RBP5.25□□□□□ -1.57
USP54-202ENST00000413442 GHSRQ92847 366 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 TNFRSF14Q92956 283 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 EMG1Q92979 244 aaKnown RBP5.25□□□□□ -1.57
USP54-202ENST00000413442 LHX4Q969G2 390 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 TMEM106AQ96A25 262 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 AJUBAQ96IF1 538 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 ZNF747Q9BV97 191 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 YTHDF1Q9BYJ9 559 aaKnown RBP5.25□□□□□ -1.57
USP54-202ENST00000413442 METTL9Q9H1A3 318 aa5.25□□□□□ -1.57
USP54-202ENST00000413442 BEX1Q9HBH7 125 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms