RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 ARPC5O15511 151 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 SPINT2O43291 252 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 SYT7O43581 403 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CDC40O60508 579 aaKnown RBP eCLIP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 EIF4E2O60573 245 aaKnown RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 REM1O75628 298 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 NDUFA7O95182 113 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CPSF4O95639 269 aaKnown RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 P04436 131 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 IFNA6P05013 189 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 GIPP09681 153 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 NBEAP1P0C6P0 100 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CT45A8P0DMV1 189 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CT45A9P0DMV2 189 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 PPIAL4FP0DN26 164 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ACP2P11117 423 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 NQO2P16083 231 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF25P17030 456 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CXCL2P19875 107 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ARR3P36575 388 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CDKN2CP42773 168 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 NKX2-1P43699 371 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ZFP36L2P47974 494 aaKnown RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 EVX1P49640 407 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 COMPP49747 757 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 GSK3BP49841 420 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 TDGF1P3P51864 188 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 PPP3R1P63098 170 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 HBA1P69905 142 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 PLGLB1Q02325 96 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 SYPL1Q16563 259 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CYP51A1Q16850 503 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF791Q3KP31 576 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 MOGAT2Q3SYC2 334 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ALG10Q5BKT4 473 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CT45A2Q5DJT8 189 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ALG10BQ5I7T1 473 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 LCE4AQ5TA78 99 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 TMEM244Q5VVB8 128 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF324BQ6AW86 544 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 OPN5Q6U736 354 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 OLIG3Q7RTU3 272 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 BCDIN3DQ7Z5W3 292 aaKnown RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 COMMD2Q86X83 199 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 RBM45Q8IUH3 476 aaKnown RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 SLC34A3Q8N130 599 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 GABRG1Q8N1C3 465 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 HORMAD2Q8N7B1 307 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ZNF283Q8N7M2 679 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 SLC16A11Q8NCK7 471 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 OR2M7Q8NG81 312 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 OR9Q2Q8NGE9 314 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 OR5D16Q8NGK9 328 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 OR13D1Q8NGV5 346 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 THAP6Q8TBB0 222 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ASB5Q8WWX0 329 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 HIST1H2ACQ93077 130 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 HIST1H2BAQ96A08 127 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 SLC25A46Q96AG3 418 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 S100PBPQ96BU1 408 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 SGK494Q96LW2 274 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 JSRP1Q96MG2 331 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 FOXN4Q96NZ1 517 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 OR14A2Q96R54 314 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 ADOQ96SZ5 270 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 TSNAXQ99598 290 aaKnown RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 PRRT1Q99946 306 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 HINT2Q9BX68 163 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 TTTY12Q9BZ98 90 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 FAM234AQ9H0X4 552 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 OR51E2Q9H255 320 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CLMPQ9H6B4 373 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 SLC25A19Q9HC21 320 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 PROK2Q9HC23 129 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 SH2D2AQ9NP31 389 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CHST11Q9NPF2 352 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 VNN3Q9NY84 501 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 B3GAT1Q9P2W7 334 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 PRODH2Q9UF12 536 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 OR52A1Q9UKL2 312 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 NPIPA1Q9UND3 350 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 SLC35A3Q9Y2D2 325 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 KLF13Q9Y2Y9 288 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 NSG2Q9Y328 171 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 CSDC2Q9Y534 153 aaKnown RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 PPIAL4AQ9Y536 164 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 KCNE3Q9Y6H6 103 aa3.93□□□□□ -1.78
SF3B1-202ENST00000409915 RP1L1Q8IWN7 2480 aaPredicted RBP3.93□□□□□ -1.78
SF3B1-202ENST00000409915 NPIPA5A0A0B4J1W7 369 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 PPIAL4CA0A0B4J2A2 164 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 IFITM10A6NMD0 228 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 NPIPA7E9PJI5 369 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 H0YIZ8 118 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 GPR31O00270 319 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 UBDO15205 165 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 EMC8O43402 210 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 SEMA7AO75326 666 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 RP2O75695 350 aa3.92□□□□□ -1.78
SF3B1-202ENST00000409915 OR2F2O95006 317 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms