RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 SAXO1Q8IYX7 474 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 OR5R1Q8NH85 324 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 RHBDD1Q8TEB9 315 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM216AQ8WUB2 273 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 MR1Q95460 341 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 PIGTQ969N2 578 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 GALNT14Q96FL9 552 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 BSCL2Q96G97 398 aaPredicted RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 COMMD4Q9H0A8 199 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 CST11Q9H112 138 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 METTL7AQ9H8H3 244 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 P4HTMQ9NXG6 502 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 PLA2G2EQ9NZK7 142 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 DOK5Q9P104 306 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 GDF2Q9UK05 429 aaPredicted RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 KLF13Q9Y2Y9 288 aaPredicted RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 TMED3Q9Y3Q3 217 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 LRP12Q9Y561 859 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A10PA6NDY2 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A18PA6NE21 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A16PA6NEW6 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 MSGN1A6NI15 193 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A20PA6NIJ5 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A8PA6NJQ4 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A7PA6NKC0 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 ZNF705GA8MUZ8 300 aaPredicted RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A22PA8MWA6 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A12PA8MX19 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A5PA8MXJ8 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A23PA8MXZ1 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 TSTD3H0UI37 97 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 M0QYG6 137 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 TLX3O43711 291 aaPredicted RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 SLC25A17O43808 307 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 DUS4LO95620 317 aaKnown RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 F10P00742 488 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 MBPP02686 304 aaPredicted RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 F13BP05160 661 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A15PP0C7V4 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A13PP0C7W8 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A14PP0C7W9 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FAM90A24PP0C7X0 464 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 CLDN15P56746 228 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 TLE3Q04726 772 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 KIAA0141Q14154 515 aaPredicted RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 C4orf17Q53FE4 359 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 GFI1BQ5VTD9 330 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 TCEAL6Q6IPX3 200 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 SSX8Q7RTT4 187 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 BPIFB2Q8N4F0 458 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 OR2M7Q8NG81 312 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 OR51D1Q8NGF3 324 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 OR1J1Q8NGS3 322 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 OR2V1Q8NHB1 315 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 S100A13Q99584 98 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 NKX3-1Q99801 234 aaPredicted RBP4.67□□□□□ -1.66
VPS41-203ENST00000395969 SLC6A7Q99884 636 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 CNTNAP3Q9BZ76 1288 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 SYT4Q9H2B2 425 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 PARD6AQ9NPB6 346 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 FOXJ2Q9P0K8 574 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 ABI3Q9P2A4 366 aa4.67□□□□□ -1.66
VPS41-203ENST00000395969 LOC100289279A0A1B0GTE1 492 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 MED19A0JLT2 244 aaPredicted RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 C1QTNF9BB2RNN3 333 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 NPIPA5E9PKD4 350 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 EFSO43281 561 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 SYNGR3O43761 229 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 DIRAS3O95661 229 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 PLGP00747 810 aaPredicted RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 SFTPBP07988 381 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 ERCC1P07992 297 aaPredicted RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 MYF5P13349 255 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 LMO1P25800 156 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 THBS4P35443 961 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 SNCAP37840 140 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 RPS10P46783 165 aaKnown RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 SUMO1P63165 101 aaKnown RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 ARF1P84077 181 aaKnown RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 CYCSP99999 105 aaKnown RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 PAX5Q02548 391 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 RAB35Q15286 201 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 C2orf76Q3KRA6 126 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 TMEM268Q5VZI3 342 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 RTL6Q6ICC9 239 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 ZNF585AQ6P3V2 769 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 PRSS54Q6PEW0 395 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 HIST3H2BBQ8N257 126 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 COMMD1Q8N668 190 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 C10orf53Q8N6V4 93 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 RNF152Q8N8N0 203 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 BEND2Q8NDZ0 799 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 PRSS33Q8NF86 280 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 C1orf147Q96MC9 270 aaPredicted RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 AKIRIN1Q9H9L7 192 aaPredicted RBP4.66□□□□□ -1.66
VPS41-203ENST00000395969 SIRT7Q9NRC8 400 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 ZDHHC8Q9ULC8 765 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 NPIPA1Q9UND3 350 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 MMP24Q9Y5R2 645 aa4.66□□□□□ -1.66
VPS41-203ENST00000395969 ZNF318Q5VUA4 2279 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms