RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 ARR3P36575 388 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 LIMS1P48059 325 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 CCL7P80098 99 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 ZXDAP98168 799 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 PABPC1L2AQ5JQF8 200 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 C6orf201Q7Z4U5 140 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 LINC01555Q8NAE3 123 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 GOLT1BQ9Y3E0 138 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 SPAG17Q6Q759 2223 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 ARFGEF1Q9Y6D6 1849 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 VDAC1P21796 283 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 IL11RAQ14626 422 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 NHLRC2Q8NBF2 726 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 DYRK2Q92630 601 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 OR10C1Q96KK4 312 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 TOX3O15405 576 aaPredicted RBP17.47■□□□□ 0.39
SHANK1-203ENST00000391813 SOX15O60248 233 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 CTLA4P16410 223 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 DDTP30046 118 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 DRD3P35462 400 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 GFERP55789 205 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 POLR2GP62487 172 aaKnown RBP eCLIP17.47■□□□□ 0.39
SHANK1-203ENST00000391813 ADPRHL1Q8NDY3 354 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 GPBAR1Q8TDU6 330 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 CTNNBIP1Q9NSA3 81 aaPredicted RBP17.47■□□□□ 0.39
SHANK1-203ENST00000391813 ICAM5Q9UMF0 924 aa17.47■□□□□ 0.39
SHANK1-203ENST00000391813 TRAV34A0A0B4J273 112 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 IGHV3-20A0A0C4DH32 117 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 TNFSF14O43557 240 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 EIF3GO75821 320 aaKnown RBP eCLIP17.46■□□□□ 0.39
SHANK1-203ENST00000391813 FBP1P09467 338 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 HLA-GP17693 338 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 FOXF1Q12946 379 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 FOXC1Q12948 553 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 COL5A1-AS1Q5SY13 56 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 MRGPREQ86SM8 312 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 MS4A3Q96HJ5 214 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 KIAA1217Q5T5P2 1943 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 HEXAP06865 529 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 ADH4P08319 380 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 ZBTB25P24278 435 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 FCER1GP30273 86 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 ZNF891A8MT65 544 aaPredicted RBP17.46■□□□□ 0.39
SHANK1-203ENST00000391813 IL3RAP26951 378 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 CDC34P49427 236 aaPredicted RBP17.46■□□□□ 0.39
SHANK1-203ENST00000391813 CLDN23Q96B33 292 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 FAM173AQ9BQD7 235 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 FAAP24Q9BTP7 215 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 IL17BQ9UHF5 180 aa17.46■□□□□ 0.39
SHANK1-203ENST00000391813 DBX1A6NMT0 343 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 SIRPB1O00241 398 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 TMEM267Q0VDI3 215 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-203ENST00000391813 CLN3Q13286 438 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 OR5I1Q13606 314 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-203ENST00000391813 ZNF552Q9H707 407 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-203ENST00000391813 ATAD5Q96QE3 1844 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 OR3A4PP47883 348 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 GGTLC2Q14390 218 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 OR5AU1Q8NGC0 362 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 BRWD1Q9NSI6 2320 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 MOSPD3O75425 235 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 CD160O95971 181 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 GCGP01275 180 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 ZNF117Q03924 483 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 DPPA3Q6W0C5 159 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 OR10G4Q8NGN3 311 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 OR10G9Q8NGN4 311 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 OR10G7Q8NGN6 311 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 KCNK15Q9H427 330 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 GEMIN2O14893 280 aaKnown RBP17.45■□□□□ 0.38
SHANK1-203ENST00000391813 FMODQ06828 376 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 CEBPEQ15744 281 aa17.45■□□□□ 0.38
SHANK1-203ENST00000391813 ZNF468Q5VIY5 522 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-203ENST00000391813 DHRS7BQ6IAN0 325 aaPredicted RBP17.45■□□□□ 0.38
SHANK1-203ENST00000391813 LOC102723971A0A1B0GUV8 181 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 FAM3BP58499 235 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-203ENST00000391813 MICBQ29980 383 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 ASB5Q8WWX0 329 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 MOGAT1Q96PD6 335 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 TMEM147Q9BVK8 224 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 PECRQ9BY49 303 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 METTL1Q9UBP6 276 aaKnown RBP17.44■□□□□ 0.38
SHANK1-203ENST00000391813 SH3BGRL2Q9UJC5 107 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 VSIG4Q9Y279 399 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 ASCC3Q8N3C0 2202 aaKnown RBP17.44■□□□□ 0.38
SHANK1-203ENST00000391813 KIR2DL1P43626 348 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-203ENST00000391813 LSM11P83369 360 aaKnown RBP eCLIP17.44■□□□□ 0.38
SHANK1-203ENST00000391813 OR8G1Q15617 311 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 DUSP15Q9H1R2 295 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-203ENST00000391813 A8MXK9 166 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 GALR2O43603 387 aaPredicted RBP17.44■□□□□ 0.38
SHANK1-203ENST00000391813 CSN1S1P47710 185 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 DYNLT3P51808 116 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 METAP1P53582 386 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 STUMQ69YW2 141 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 GALMQ96C23 342 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 OR2A5Q96R48 311 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 FLRT3Q9NZU0 649 aa17.44■□□□□ 0.38
SHANK1-203ENST00000391813 ALG1L2C9J202 215 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 129.3 ms