RNA–Protein interactions for RNA: ENST00000375254.7

UBR4-204, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR4, Length 15,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-204ENST00000375254 GEMIN7Q9H840 131 aaKnown RBP5.9□□□□□ -1.47
UBR4-204ENST00000375254 SEBOXQ9HB31 216 aaPredicted RBP5.9□□□□□ -1.47
UBR4-204ENST00000375254 SPHK2Q9NRA0 654 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 FTSJ1Q9UET6 329 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 MMP23AO75900 390 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 SP1P08047 785 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 PMP22Q01453 160 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 MFSD12Q6NUT3 480 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 CALHM1Q8IU99 346 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 LSM10Q969L4 123 aaKnown RBP5.9□□□□□ -1.47
UBR4-204ENST00000375254 PEX11GQ96HA9 241 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 TMEM272A0A1B0GTI8 110 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 FOXK1P85037 733 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 KLRB1Q12918 225 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 SDHCQ99643 169 aaPredicted RBP5.9□□□□□ -1.47
UBR4-204ENST00000375254 SEPSECSQ9HD40 501 aaKnown RBP5.9□□□□□ -1.47
UBR4-204ENST00000375254 GFYI3L273 518 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 SOCS7O14512 581 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 CTSVO60911 334 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 CA11O75493 328 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 TRAT1Q6PIZ9 186 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 ABHD5Q8WTS1 349 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 MRPL42Q9Y6G3 142 aaKnown RBP5.9□□□□□ -1.47
UBR4-204ENST00000375254 PI3P19957 117 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 SOX8P57073 446 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 HIST1H1AQ02539 215 aaPredicted RBP5.9□□□□□ -1.47
UBR4-204ENST00000375254 MYBPHQ13203 477 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 OR10J3Q5JRS4 329 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 ANKRD37Q7Z713 158 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 OTOSQ8NHW6 89 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 TMEM170AQ8WVE7 144 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 MISP3Q96FF7 219 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 MRPL18Q9H0U6 180 aaKnown RBP5.9□□□□□ -1.47
UBR4-204ENST00000375254 PDLIM7Q9NR12 457 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 P2RY10O00398 339 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 ONECUT2O95948 504 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 PDPNQ86YL7 162 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 NPWQ8N729 165 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 COX11Q9Y6N1 276 aa5.9□□□□□ -1.47
UBR4-204ENST00000375254 CDC14BO60729 498 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 DYNLT3P51808 116 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 PIANPQ8IYJ0 282 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 COMMD5Q9GZQ3 224 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 WRAP73Q9P2S5 460 aaPredicted RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 HMGN4O00479 90 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 C1QTNF9P0C862 333 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 NPPBP16860 134 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 NMUP48645 174 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 ZXDBP98169 803 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 RUNX2Q13950 521 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 CTU1Q7Z7A3 348 aaKnown RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 PLXDC1Q8IUK5 500 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 BIVM-ERCC5R4GMW8 1640 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 MBLAC1A4D2B0 266 aaPredicted RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 CLDN23Q96B33 292 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 PRR35P0CG20 571 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 KLRK1P26718 216 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 S100A7L2Q5SY68 101 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 Q96M85 177 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 PBOV1Q9GZY1 135 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 MRPL16Q9NX20 251 aaKnown RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 NPTNQ9Y639 398 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 FEZF1A0PJY2 475 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 RND1Q92730 232 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 MRGPRX3Q96LB0 322 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 MICAL3Q7RTP6 2002 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 LINC01549A6NIU2 74 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 CER1O95813 267 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 FBXO46Q6PJ61 603 aaPredicted RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 OR4F17Q8NGA8 305 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 ULBP2Q9BZM5 246 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 CXorf51AA0A1B0GTR3 108 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 IFITM1P13164 125 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 RND3P61587 244 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 CSTL1Q9H114 145 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 C11orf68Q9H3H3 251 aaKnown RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 BARX1Q9HBU1 254 aaPredicted RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 PLIN4Q96Q06 1357 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 BCAT2O15382 392 aaPredicted RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 GPR62Q9BZJ7 368 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 IGHEP01854 428 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 CRYAAP02489 173 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 SPINK8P0C7L1 97 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 C22orf39Q6P5X5 142 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 VHLLQ6RSH7 139 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 BOD1L2Q8IYS8 172 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 SIGLEC11Q96RL6 698 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 NKX2-6A6NCS4 301 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 OR4C46A6NHA9 309 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 S100A4P26447 101 aaKnown RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 RPL30P62888 115 aaKnown RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 IGHV1-69-2A0A0G2JMI3 117 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 LOC107986453A0A1B0GWG9 222 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 CCSMST1Q4G0I0 132 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 CPEB3Q8NE35 698 aaKnown RBP5.89□□□□□ -1.47
UBR4-204ENST00000375254 AICDAQ9GZX7 198 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 TRBV23OR9-2A0A075B6M9 112 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 TRAV8-2A0A0B4J237 113 aa5.89□□□□□ -1.47
UBR4-204ENST00000375254 APOMO95445 188 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms