RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 C16orf82Q7Z2V1 217 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 CENPVQ7Z7K6 275 aaPredicted RBP11.01□□□□□ -0.65
CXCL12-202ENST00000374426 EGFL6Q8IUX8 553 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 DNAJC9Q8WXX5 260 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 RCC1LQ96I51 464 aaKnown RBP11.01□□□□□ -0.65
CXCL12-202ENST00000374426 MNTQ99583 582 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 LIN7BQ9HAP6 207 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 PLEKHA1Q9HB21 404 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 SEBOXQ9HB31 216 aaPredicted RBP11.01□□□□□ -0.65
CXCL12-202ENST00000374426 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.01□□□□□ -0.65
CXCL12-202ENST00000374426 INPP5EQ9NRR6 644 aa11.01□□□□□ -0.65
CXCL12-202ENST00000374426 ZNF670-ZNF695F2Z2N8 137 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 H3BUI4 141 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 RPP14O95059 124 aaKnown RBP11□□□□□ -0.65
CXCL12-202ENST00000374426 AMY1AP04745 511 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 AMY2AP04746 511 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 LPLP06858 475 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 GABRR1P24046 479 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 PEX2P28328 305 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 DUSP1P28562 367 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 DAPP51397 102 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 FUT6P51993 359 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 CBX1P83916 185 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 ZNF91Q05481 1191 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 ABCA11PQ4W5N1 156 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 FAHD1Q6P587 224 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 ZBTB49Q6ZSB9 765 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 CATSPERDQ86XM0 798 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 EMG1Q92979 244 aaKnown RBP11□□□□□ -0.65
CXCL12-202ENST00000374426 AKR1E2Q96JD6 320 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 THTPAQ9BU02 230 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 CHST5Q9GZS9 411 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 RBFOX1Q9NWB1 397 aaKnown RBP11□□□□□ -0.65
CXCL12-202ENST00000374426 DPM3Q9P2X0 92 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 KIAA2026Q5HYC2 2103 aa11□□□□□ -0.65
CXCL12-202ENST00000374426 STAB2Q8WWQ8 2551 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 SYT7O43581 403 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 FKBP6O75344 327 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 GATBO75879 557 aaKnown RBP10.99□□□□□ -0.65
CXCL12-202ENST00000374426 DUS4LO95620 317 aaKnown RBP10.99□□□□□ -0.65
CXCL12-202ENST00000374426 EPHA2P29317 976 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 OR3A1P47881 315 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 NPBWR2P48146 333 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 P2RX3P56373 397 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 BDH1Q02338 343 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 EGFEM1PQ0D2K5 195 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 DEFB121Q5J5C9 76 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 PRAMEF5Q5TYX0 476 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 SLX4IPQ5VYV7 408 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 NXNL2Q5VZ03 156 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 ABHD12Q8N2K0 398 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 TCEANCQ8N8B7 351 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 YIPF7Q8N8F6 280 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 OR4X2Q8NGF9 303 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 BORCS8Q96FH0 119 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 SLC25A33Q9BSK2 321 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 PRRG3Q9BZD7 231 aa10.99□□□□□ -0.65
CXCL12-202ENST00000374426 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-202ENST00000374426 H2AFY2Q9P0M6 372 aaPredicted RBP10.99□□□□□ -0.65
CXCL12-202ENST00000374426 TRBV2A0A0J9YWF9 115 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 SH2D7A6NKC9 451 aaPredicted RBP10.98□□□□□ -0.65
CXCL12-202ENST00000374426 MGST3O14880 152 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 ENTPD6O75354 484 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 OR2F2O95006 317 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 IGLV1-47P01700 117 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 KRT8P05787 483 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 VSIG8P0DPA2 414 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 BCL3P20749 454 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 ERP29P30040 261 aaKnown RBP10.98□□□□□ -0.65
CXCL12-202ENST00000374426 HOXD3P31249 432 aaPredicted RBP10.98□□□□□ -0.65
CXCL12-202ENST00000374426 BRS3P32247 399 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 ZNF146Q15072 292 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 TRAPPC6BQ86SZ2 158 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 SPATA24Q86W54 205 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 Q8IYB0 196 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 ENTHD1Q8IYW4 607 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 FAM58AQ8N1B3 248 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 LINC00482Q8N8I6 264 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 TMEM163Q8TC26 289 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 BCAS4Q8TDM0 211 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 CAPSLQ8WWF8 208 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 STMN2Q93045 179 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 NRBF2Q96F24 287 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 RBM14Q96PK6 669 aaKnown RBP10.98□□□□□ -0.65
CXCL12-202ENST00000374426 TBX5Q99593 518 aa10.98□□□□□ -0.65
CXCL12-202ENST00000374426 UBE2J1Q9Y385 318 aaPredicted RBP10.98□□□□□ -0.65
CXCL12-202ENST00000374426 A0A1W2PQL4 384 aaPredicted RBP10.97□□□□□ -0.65
CXCL12-202ENST00000374426 TCRBV3S1A0A5B6 114 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 FAM172BPA6NC97 362 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 MITFO75030 526 aaPredicted RBP10.97□□□□□ -0.65
CXCL12-202ENST00000374426 CALCBP10092 127 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 CDK2P24941 298 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 GDNFP39905 211 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 SNU13P55769 128 aaKnown RBP10.97□□□□□ -0.65
CXCL12-202ENST00000374426 FLOT2Q14254 428 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 KHDC1LQ5JSQ8 128 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 C12orf73Q69YU5 71 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 HEPN1Q6WQI6 88 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 RTN4RL2Q86UN3 420 aa10.97□□□□□ -0.65
CXCL12-202ENST00000374426 PRSS35Q8N3Z0 413 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms