RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 POM121L2Q96KW2 1035 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 IP6K3Q96PC2 410 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 RYDENQ9NUL5 291 aaKnown RBP13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 SHPKQ9UHJ6 478 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 HSF4Q9ULV5 492 aa13.75□□□□□ -0.21
CNKSR1-202ENST00000374253 SNAPC5O75971 98 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 FCGR2CP31995 323 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 WNT5AP41221 380 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 UBA52P62987 128 aaKnown RBP13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 MALLQ13021 153 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 CLN3Q13286 438 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 RNPS1Q15287 305 aaKnown RBP13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 TSC22D1Q15714 1073 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 ELP2Q6IA86 826 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 MYPOPQ86VE0 399 aaPredicted RBP13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 PXT1Q8NFP0 134 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 FDCSPQ8NFU4 85 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 ANGPTL6Q8NI99 470 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 NMES1Q9C002 83 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 SYNGR1O43759 233 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 PDCD6O75340 191 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 IFNA2P01563 188 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 CELA3BP08861 270 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 NOVA1P51513 510 aaKnown RBP13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 PIGPP57054 158 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 SOX8P57073 446 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 ZNF345Q14585 488 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 NRN1LQ496H8 165 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 IGSF11Q5DX21 431 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 OR11L1Q8NGX0 322 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 APOBEC3DQ96AK3 386 aaPredicted RBP13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 RAB18Q9NP72 206 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 NECAP2Q9NVZ3 263 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 PFDN2Q9UHV9 154 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 ZNF318Q5VUA4 2279 aa13.74□□□□□ -0.21
CNKSR1-202ENST00000374253 RBMXP38159 391 aaKnown RBP13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 PLP2Q04941 152 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 FAM209AQ5JX71 171 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 RTL6Q6ICC9 239 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 MDP1Q86V88 176 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 ZDHHC23Q8IYP9 409 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 OR5T2Q8NGG2 359 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 MTCH1Q9NZJ7 389 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 CEP250Q9BV73 2442 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 PQLC2LA1A4F0 135 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 CA11O75493 328 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 CALCRP30988 508 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 PPA1Q15181 289 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 OR2T2Q6IF00 324 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 OR5L1Q8NGL2 311 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 MRPL24Q96A35 216 aaKnown RBP13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 GPHA2Q96T91 129 aa13.73□□□□□ -0.21
CNKSR1-202ENST00000374253 TUBAL3A6NHL2 446 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 ACTL6AO96019 429 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 TNFSF10P50591 281 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 RBM39Q14498 530 aaKnown RBP13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 HAGHLQ6PII5 290 aaPredicted RBP13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 SGPP2Q8IWX5 399 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 C17orf78Q8N4C9 275 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 OR2S2Q9NQN1 319 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 CD300LBA8K4G0 201 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 RRP8O43159 456 aaKnown RBP13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 ZNF728P0DKX0 622 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 FUT3P21217 361 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 APLNRP35414 380 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 IAH1Q2TAA2 248 aaPredicted RBP13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 OR1K1Q8NGR3 316 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 EXTL1Q92935 676 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 ARPC5LQ9BPX5 153 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 MS4A7Q9GZW8 240 aaPredicted RBP13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 C12orf4Q9NQ89 552 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 EDARQ9UNE0 448 aa13.72□□□□□ -0.21
CNKSR1-202ENST00000374253 SHOXO15266 292 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 GALR2O43603 387 aaPredicted RBP13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 LYZL6O75951 148 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 SCGB1D2O95969 90 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 ARR3P36575 388 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 TUSC1Q2TAM9 212 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 ABCA11PQ4W5N1 156 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 FBXW9Q5XUX1 488 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 P4HA3Q7Z4N8 544 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 PIP4P1Q86T03 277 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 STPG2Q8N412 459 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 POC1AQ8NBT0 407 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 NEK7Q8TDX7 302 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 RASL12Q9NYN1 266 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 IL36GQ9NZH8 169 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 ATMQ13315 3056 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 CTSDP07339 412 aaPredicted RBP13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 OR5AC1P0C628 307 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 CA6P23280 308 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 DTYMKP23919 212 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 ERVS71-1P61550 626 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 CEACAM21Q3KPI0 293 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 TMEM178AQ8NBL3 297 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 GALNT11Q8NCW6 608 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 C2orf50Q96LR7 162 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 ZNF286AQ9HBT8 521 aa13.71□□□□□ -0.21
CNKSR1-202ENST00000374253 CRYM-AS1A6NIL9 109 aa13.7□□□□□ -0.22
CNKSR1-202ENST00000374253 BET1O15155 118 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms