RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 ZNF726A6NNF4 738 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 KIAA1324LA8MWY0 1029 aaPredicted RBP8.93□□□□□ -0.98
COL5A1-202ENST00000371820 ZNF878C9JN71 531 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 INAFM1C9JVW0 142 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 TRAF3IP2O43734 574 aaPredicted RBP8.93□□□□□ -0.98
COL5A1-202ENST00000371820 DUS4LO95620 317 aaKnown RBP8.93□□□□□ -0.98
COL5A1-202ENST00000371820 PNPP00491 289 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 CFDP00746 253 aaPredicted RBP8.93□□□□□ -0.98
COL5A1-202ENST00000371820 IGHG1P01857 330 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 CRYAAP02489 173 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 NMBP08949 121 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 PET100P0DJ07 73 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 ZNF20P17024 532 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 NAT1P18440 290 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 FABP6P51161 128 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 NAAAQ02083 359 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 POU3F1Q03052 451 aaPredicted RBP8.93□□□□□ -0.98
COL5A1-202ENST00000371820 CDNFQ49AH0 187 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 AWAT2Q6E213 333 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 ZNF813Q6ZN06 617 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 DOK3Q7L591 496 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 MUC15Q8N387 334 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 FAM169BQ8N8A8 192 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 PNLDC1Q8NA58 520 aaKnown RBP8.93□□□□□ -0.98
COL5A1-202ENST00000371820 OR56B1Q8NGI3 324 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 OR8S1Q8NH09 359 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 COQ8AQ8NI60 647 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 ST7LQ8TDW4 575 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 MITD1Q8WV92 249 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 VRK1Q99986 396 aaPredicted RBP8.93□□□□□ -0.98
COL5A1-202ENST00000371820 REG4Q9BYZ8 158 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 NMES1Q9C002 83 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 SHARPINQ9H0F6 387 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 NARFLQ9H6Q4 476 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 CA10Q9NS85 328 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 FBXO9Q9UK97 447 aaPredicted RBP8.93□□□□□ -0.98
COL5A1-202ENST00000371820 TMA7Q9Y2S6 64 aaKnown RBP8.93□□□□□ -0.98
COL5A1-202ENST00000371820 NOP16Q9Y3C1 178 aaKnown RBP8.93□□□□□ -0.98
COL5A1-202ENST00000371820 ATP23Q9Y6H3 246 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 USF3Q68DE3 2245 aa8.93□□□□□ -0.98
COL5A1-202ENST00000371820 LOC105371267A0A1B0GV96 52 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 VSTM5A8MXK1 200 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 E7EQL1 145 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 ZNF735P0CB33 412 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 ZBTB25P24278 435 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 APOBEC3AP31941 199 aaPredicted RBP8.92□□□□□ -0.98
COL5A1-202ENST00000371820 CDKN1AP38936 164 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 PRKXP51817 358 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 EFNB2P52799 333 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 H2BFSP57053 126 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 CLRN1P58418 232 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 LSM6P62312 80 aaKnown RBP8.92□□□□□ -0.98
COL5A1-202ENST00000371820 IL13RA1P78552 427 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 CLEC12BQ2HXU8 276 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 HIKESHIQ53FT3 197 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 ZNF529Q6P280 563 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 FAM122CQ6P4D5 195 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 LYPD6Q86Y78 171 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 PLPP7Q8NBV4 271 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 CHST4Q8NCG5 386 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 BVESQ8NE79 360 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 TMEM185AQ8NFB2 350 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 OR51A4Q8NGJ6 313 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 OR10R2Q8NGX6 335 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 OR10AC1Q8NH08 325 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 OR6X1Q8NH79 312 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 NANOS1Q8WY41 292 aaKnown RBP8.92□□□□□ -0.98
COL5A1-202ENST00000371820 BCL2L2Q92843 193 aaPredicted RBP8.92□□□□□ -0.98
COL5A1-202ENST00000371820 FGGYQ96C11 551 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 SLAMF6Q96DU3 332 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 AMELYQ99218 206 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 MDFIQ99750 246 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 AIFM2Q9BRQ8 373 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 C1QTNF6Q9BXI9 259 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 PBOV1Q9GZY1 135 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 CRLF2Q9HC73 371 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 GPR35Q9HC97 309 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.92□□□□□ -0.98
COL5A1-202ENST00000371820 CENPMQ9NSP4 180 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 TNFSF18Q9UNG2 199 aa8.92□□□□□ -0.98
COL5A1-202ENST00000371820 ANK3Q12955 4377 aaKnown RBP8.92□□□□□ -0.98
COL5A1-202ENST00000371820 PRR14LQ5THK1 2151 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 TAAR5O14804 337 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 BCL2L11O43521 198 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 MTRF1O75570 445 aaKnown RBP8.91□□□□□ -0.98
COL5A1-202ENST00000371820 PRKACBP22694 351 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 PSMB6P28072 239 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 ZNF93P35789 620 aaPredicted RBP8.91□□□□□ -0.98
COL5A1-202ENST00000371820 ARR3P36575 388 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 ALDH3B1P43353 468 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 DSCR9P59020 149 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 ARF1P84077 181 aaKnown RBP8.91□□□□□ -0.98
COL5A1-202ENST00000371820 KRTAP1-1Q07627 177 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 SPOCK1Q08629 439 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 DHRS2Q13268 280 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 SURF2Q15527 256 aaPredicted RBP8.91□□□□□ -0.98
COL5A1-202ENST00000371820 ODF4Q2M2E3 257 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 CEACAM16Q2WEN9 425 aa8.91□□□□□ -0.98
COL5A1-202ENST00000371820 PAN3Q58A45 887 aaKnown RBP8.91□□□□□ -0.98
COL5A1-202ENST00000371820 TMEM128Q5BJH2 165 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms