RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 FAM90A10PA6NDY2 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A18PA6NE21 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A16PA6NEW6 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A20PA6NIJ5 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A8PA6NJQ4 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A7PA6NKC0 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A22PA8MWA6 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A12PA8MX19 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A5PA8MXJ8 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A23PA8MXZ1 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 LYRM1O43325 122 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FCER2P06734 321 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A15PP0C7V4 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A13PP0C7W8 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A14PP0C7W9 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 FAM90A24PP0C7X0 464 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 DUSP1P28562 367 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 PNLIPRP3Q17RR3 467 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 BRICD5Q6PL45 260 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 NRARPQ7Z6K4 114 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 TRAPPC6BQ86SZ2 158 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 WDR13Q9H1Z4 485 aa15.71■□□□□ 0.11
CLN3-206ENST00000360019 A0A1B0GVG6 124 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 hCG_1807616A0A1W2PRN6 198 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 SERPINE3A8MV23 424 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 WNT9BO14905 357 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 PDCD6O75340 191 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 NXPH2O95156 264 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 SPNP16150 400 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 PMELP40967 661 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 GATA4P43694 442 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 GNG2P59768 71 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 IL13RA2Q14627 380 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 MPV17LQ2QL34 196 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 TRIM16LQ309B1 348 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 PCGF3Q3KNV8 242 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 MOGAT3Q86VF5 341 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 NEDD4LQ96PU5 975 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 SULT4A1Q9BR01 284 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 FAAP24Q9BTP7 215 aa15.71■□□□□ 0.1
CLN3-206ENST00000360019 LRRK2Q5S007 2527 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 B9A039 149 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 PRSS44E7EML9 344 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 CD55P08174 381 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 TNFSF4P23510 183 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 SRSF1Q07955 248 aaKnown RBP eCLIP15.7■□□□□ 0.1
CLN3-206ENST00000360019 ARL6IP1Q15041 203 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 SWI5Q1ZZU3 235 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 LINC00596Q86U02 117 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 MUC15Q8N387 334 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 GVQW1Q8N7I0 195 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 COX4I2Q96KJ9 171 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 DIRC2Q96SL1 478 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 RCC2Q9P258 522 aaKnown RBP15.7■□□□□ 0.1
CLN3-206ENST00000360019 CACNG2Q9Y698 323 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 ARFGEF3Q5TH69 2177 aa15.7■□□□□ 0.1
CLN3-206ENST00000360019 ECDO95905 644 aaPredicted RBP15.69■□□□□ 0.1
CLN3-206ENST00000360019 FUT3P21217 361 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 ACTBP60709 375 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 ACTG1P63261 375 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 CCL8P80075 99 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 SSBP1Q04837 148 aaKnown RBP15.69■□□□□ 0.1
CLN3-206ENST00000360019 IKZF1Q13422 519 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 DYRK1AQ13627 763 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 ARFRP1Q13795 201 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 ATAD3CQ5T2N8 411 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 LRRC29Q8WV35 223 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 FN3KRPQ9HA64 309 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 GCM1Q9NP62 436 aa15.69■□□□□ 0.1
CLN3-206ENST00000360019 A0A1W2PPR1 153 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 CA11O75493 328 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 EGR1P18146 543 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 GLRA1P23415 457 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 BTCP35070 178 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 CFHR2P36980 270 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 ZNF146Q15072 292 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 Q6P435 159 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 GCSAMQ8N6F7 178 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 OR10Z1Q8NGY1 313 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 DYRK2Q92630 601 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 HDHD3Q9BSH5 251 aaPredicted RBP15.68■□□□□ 0.1
CLN3-206ENST00000360019 DYNLRB1Q9NP97 96 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 AK3Q9UIJ7 227 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 MT-ND4P03905 459 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 CSF1P09603 554 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 GSTT2BP0CG30 244 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 AP3S2P59780 193 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 FAM209AQ5JX71 171 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 ACP7Q6ZNF0 438 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 Q6ZNX1 250 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 MINDY2Q8NBR6 621 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 FBXW5Q969U6 566 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 HRASLSQ9HDD0 168 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 TAS2R8Q9NYW2 309 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 ANAPC10Q9UM13 185 aa15.68■□□□□ 0.1
CLN3-206ENST00000360019 SRRM5B3KS81 715 aa15.67■□□□□ 0.1
CLN3-206ENST00000360019 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.67■□□□□ 0.1
CLN3-206ENST00000360019 FAAP20Q6NZ36 180 aa15.67■□□□□ 0.1
CLN3-206ENST00000360019 OR4S1Q8NGB4 309 aa15.67■□□□□ 0.1
CLN3-206ENST00000360019 MS4A5Q9H3V2 200 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms