RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 BCL3P20749 454 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 IGHV1-2P23083 117 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 CALCRP30988 508 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 OPRM1P35372 400 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 UBE2NP61088 152 aaKnown RBP14.34□□□□□ -0.11
SAMM50-201ENST00000350028 GUSBP1Q15486 140 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 OR5P3Q8WZ94 311 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 SLAMF9Q96A28 289 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 ZNF442Q9H7R0 627 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 C12orf4Q9NQ89 552 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 KIF25Q9UIL4 384 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 KCNMB2Q9Y691 235 aa14.34□□□□□ -0.11
SAMM50-201ENST00000350028 SPTBN2O15020 2390 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 ZFHX4Q86UP3 3567 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 TRAPPC2LH3BP13 241 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 OR7C1O76099 320 aaPredicted RBP14.33□□□□□ -0.12
SAMM50-201ENST00000350028 CRHP06850 196 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 ZNF14P17017 642 aaPredicted RBP14.33□□□□□ -0.12
SAMM50-201ENST00000350028 PSMB6P28072 239 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 BRICD5Q6PL45 260 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 ACOT7LQ6ZUV0 252 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 SCARB1Q8WTV0 552 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 WNT2BQ93097 391 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 RDH8Q9NYR8 311 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 SPTBN4Q9H254 2564 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 MED12LQ86YW9 2145 aa14.33□□□□□ -0.12
SAMM50-201ENST00000350028 GNG3P63215 75 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 MPV17LQ2QL34 196 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 ANKRD55Q3KP44 614 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 LRRC37A5PQ49AS3 106 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 INO80CQ6PI98 192 aaPredicted RBP14.32□□□□□ -0.12
SAMM50-201ENST00000350028 SLC22A25Q6T423 547 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 Q6ZT83 130 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 ZNF573Q86YE8 665 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 ZADH2Q8N4Q0 377 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 PLK3Q9H4B4 646 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 CHMP1AQ9HD42 196 aaPredicted RBP14.32□□□□□ -0.12
SAMM50-201ENST00000350028 PLSCR2Q9NRY7 297 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 ZNF629Q9UEG4 869 aaPredicted RBP14.32□□□□□ -0.12
SAMM50-201ENST00000350028 PIEZO1Q92508 2521 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 IFNA2P01563 188 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 AP2S1P53680 142 aaPredicted RBP14.32□□□□□ -0.12
SAMM50-201ENST00000350028 DAZAP2Q15038 168 aaPredicted RBP14.32□□□□□ -0.12
SAMM50-201ENST00000350028 PDCD1Q15116 288 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 GABRA6Q16445 453 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 SRSF7Q16629 238 aaKnown RBP eCLIP14.32□□□□□ -0.12
SAMM50-201ENST00000350028 FBXW12Q6X9E4 464 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 SGPP2Q8IWX5 399 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 DYRK2Q92630 601 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 EXTL1Q92935 676 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 CDH20Q9HBT6 801 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 MTCH1Q9NZJ7 389 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 LHX6Q9UPM6 363 aa14.32□□□□□ -0.12
SAMM50-201ENST00000350028 KANTRA0A1W2PQU2 76 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 AHRRA9YTQ3 701 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 KNG1P01042 644 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 PTGER4P35408 488 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 RBMXP38159 391 aaKnown RBP14.31□□□□□ -0.12
SAMM50-201ENST00000350028 UBA52P62987 128 aaKnown RBP14.31□□□□□ -0.12
SAMM50-201ENST00000350028 OR2A2Q6IF42 318 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 Q6ZS49 121 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 LINC00596Q86U02 117 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 GCNT2Q8N0V5 402 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 PIK3IP1Q96FE7 263 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 BOD1Q96IK1 185 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 VRK1Q99986 396 aaPredicted RBP14.31□□□□□ -0.12
SAMM50-201ENST00000350028 PKIBQ9C010 78 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 METTL8Q9H825 291 aaKnown RBP14.31□□□□□ -0.12
SAMM50-201ENST00000350028 C1orf123Q9NWV4 160 aa14.31□□□□□ -0.12
SAMM50-201ENST00000350028 FAM221AA4D161 298 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 CRYM-AS1A6NIL9 109 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 ADAP1O75689 374 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 ZNF728P0DKX0 622 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 IL32P24001 234 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 GLP1RP43220 463 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 UCP3P55916 312 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 IL24Q13007 206 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 OR2T2Q6IF00 324 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 INO80EQ8NBZ0 244 aaPredicted RBP14.3□□□□□ -0.12
SAMM50-201ENST00000350028 BHLHE23Q8NDY6 225 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 C2orf50Q96LR7 162 aa14.3□□□□□ -0.12
SAMM50-201ENST00000350028 RCC2Q9P258 522 aaKnown RBP14.3□□□□□ -0.12
SAMM50-201ENST00000350028 TRBV6-7A0A0A0MS04 114 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 TEX13DA0A0J9YY54 714 aaPredicted RBP14.29□□□□□ -0.12
SAMM50-201ENST00000350028 RNF222A6NCQ9 220 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 BCL2L11O43521 198 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 WISP2O76076 250 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 KIR2DL2P43627 348 aaPredicted RBP14.29□□□□□ -0.12
SAMM50-201ENST00000350028 PPP1CBP62140 327 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 ZNF169Q14929 603 aaPredicted RBP14.29□□□□□ -0.12
SAMM50-201ENST00000350028 HAGHLQ6PII5 290 aaPredicted RBP14.29□□□□□ -0.12
SAMM50-201ENST00000350028 IGFL3Q6UXB1 125 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 COMMD7Q86VX2 200 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 C9orf106Q8NAJ2 232 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 C1orf162Q8NEQ5 155 aaPredicted RBP14.29□□□□□ -0.12
SAMM50-201ENST00000350028 OR5M9Q8NGP3 310 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 MARS2Q96GW9 593 aaKnown RBP14.29□□□□□ -0.12
SAMM50-201ENST00000350028 OR51B6Q9H340 312 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 LIME1Q9H400 295 aa14.29□□□□□ -0.12
SAMM50-201ENST00000350028 RHOFQ9HBH0 211 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms