RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 COX7A1P24310 79 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 PDZK1IP1Q13113 114 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 ZNF146Q15072 292 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 CNN3Q15417 329 aaKnown RBP13.81□□□□□ -0.2
BRCC3-202ENST00000340647 ZBTB49Q6ZSB9 765 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 SYS1Q8N2H4 156 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 ASCC1Q8N9N2 400 aaKnown RBP13.81□□□□□ -0.2
BRCC3-202ENST00000340647 OR4S1Q8NGB4 309 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 RGP1Q92546 391 aaPredicted RBP13.81□□□□□ -0.2
BRCC3-202ENST00000340647 EMG1Q92979 244 aaKnown RBP13.81□□□□□ -0.2
BRCC3-202ENST00000340647 SNX22Q96L94 193 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 HHLA2Q9UM44 414 aa13.81□□□□□ -0.2
BRCC3-202ENST00000340647 MMP23AO75900 390 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 PAHP00439 452 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 SERPINA3P01011 423 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 MT-ND2P03891 347 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 ZNF728P0DKX0 622 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 JUNBP17275 347 aaPredicted RBP13.8□□□□□ -0.2
BRCC3-202ENST00000340647 OR3A1P47881 315 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 POU3F4P49335 361 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 ATP1B3P54709 279 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 MTCP1P56278 107 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 ZP1P60852 638 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 XAF1Q6GPH4 301 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 FAM58AQ8N1B3 248 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 OR5R1Q8NH85 324 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 OPALINQ96PE5 141 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 PDCD1LG2Q9BQ51 273 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 CHST6Q9GZX3 395 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 HEXA-AS1Q9H8Q6 139 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 HMG20AQ9NP66 347 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 SIGLEC9Q9Y336 463 aa13.8□□□□□ -0.2
BRCC3-202ENST00000340647 KDM4BO94953 1096 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 CLIC3O95833 236 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 IGHV1-8P0DP01 117 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 TGFBR2P37173 567 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 GTF2A1P52655 376 aaPredicted RBP13.79□□□□□ -0.2
BRCC3-202ENST00000340647 DEFA6Q01524 100 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 LY6EQ16553 131 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 LRRC75BQ2VPJ9 315 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 HIST2H2BDQ6DRA6 164 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 DHRS7BQ6IAN0 325 aaPredicted RBP13.79□□□□□ -0.2
BRCC3-202ENST00000340647 ZNF529Q6P280 563 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 Q6P435 159 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 CCBE1Q6UXH8 406 aaPredicted RBP13.79□□□□□ -0.2
BRCC3-202ENST00000340647 BAIAP2L2Q6UXY1 529 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 LHFPL2Q6ZUX7 228 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 OR11H6Q8NGC7 330 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 OR13C9Q8NGT0 318 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 RPS4Y2Q8TD47 263 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 SPSB1Q96BD6 273 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 PPA2Q9H2U2 334 aa13.79□□□□□ -0.2
BRCC3-202ENST00000340647 TET2Q6N021 2002 aaPredicted RBP13.78□□□□□ -0.2
BRCC3-202ENST00000340647 EBAG9O00559 213 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 PRKACBP22694 351 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 RAB13P51153 203 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 SNU13P55769 128 aaKnown RBP13.78□□□□□ -0.2
BRCC3-202ENST00000340647 EDDM3BP56851 147 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 ACTA2P62736 377 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 ACTG2P63267 376 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 RAB40BQ12829 278 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 EDDM3AQ14507 147 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 AANATQ16613 207 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 UTF1Q5T230 341 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 ZNF626Q68DY1 528 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 BRICD5Q6PL45 260 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 PARP16Q8N5Y8 322 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 OR5D18Q8NGL1 313 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 OR13C3Q8NGS6 347 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 JAM3Q9BX67 310 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 FGF20Q9NP95 211 aaPredicted RBP13.78□□□□□ -0.2
BRCC3-202ENST00000340647 FBLN5Q9UBX5 448 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 SIRT4Q9Y6E7 314 aaPredicted RBP13.78□□□□□ -0.2
BRCC3-202ENST00000340647 NOTCH1P46531 2555 aa13.78□□□□□ -0.2
BRCC3-202ENST00000340647 VGLL3A8MV65 326 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 MPZL2O60487 215 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 ALX3O95076 343 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 RBP4P02753 201 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 ZNF20P17024 532 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 PRKACAP17612 351 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 LMO1P25800 156 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 GDNFP39905 211 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 MEF2CQ06413 473 aaPredicted RBP13.77□□□□□ -0.21
BRCC3-202ENST00000340647 CDK5R1Q15078 307 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 GDPD3Q7L5L3 318 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 Q8IYB0 196 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 OR51A2Q8NGJ7 313 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 COMMD4Q9H0A8 199 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 ZCCHC4Q9H5U6 513 aa13.77□□□□□ -0.21
BRCC3-202ENST00000340647 A0A1W2PPH5 198 aa13.76□□□□□ -0.21
BRCC3-202ENST00000340647 SNTNA6NMZ2 147 aa13.76□□□□□ -0.21
BRCC3-202ENST00000340647 FADS2O95864 444 aaKnown RBP13.76□□□□□ -0.21
BRCC3-202ENST00000340647 OR2H2O95918 312 aa13.76□□□□□ -0.21
BRCC3-202ENST00000340647 LALBAP00709 142 aa13.76□□□□□ -0.21
BRCC3-202ENST00000340647 ETV1P50549 477 aa13.76□□□□□ -0.21
BRCC3-202ENST00000340647 EFNB2P52799 333 aa13.76□□□□□ -0.21
BRCC3-202ENST00000340647 IL18R1Q13478 541 aa13.76□□□□□ -0.21
BRCC3-202ENST00000340647 DOC2BQ14184 412 aa13.76□□□□□ -0.21
BRCC3-202ENST00000340647 GRK1Q15835 563 aa13.76□□□□□ -0.21
BRCC3-202ENST00000340647 ZNF691Q5VV52 312 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 298.2 ms