RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 EEF1B2P24534 225 aaKnown RBP15.83■□□□□ 0.12
SYNE4-202ENST00000340477 BDKRB2P30411 391 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 NPBWR2P48146 333 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 HILS1P60008 231 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 RPL31P62899 125 aaKnown RBP15.83■□□□□ 0.12
SYNE4-202ENST00000340477 SPHARQ15513 63 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 RBM48Q5RL73 367 aaKnown RBP15.83■□□□□ 0.12
SYNE4-202ENST00000340477 DDI2Q5TDH0 399 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 GDPD3Q7L5L3 318 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 VMO1Q7Z5L0 202 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 OR5D13Q8NGL4 314 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 PPP1R35Q8TAP8 253 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 TNFAIP8L1Q8WVP5 186 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 TBX15Q96SF7 602 aa15.83■□□□□ 0.12
SYNE4-202ENST00000340477 ZNF184Q99676 751 aaPredicted RBP15.83■□□□□ 0.12
SYNE4-202ENST00000340477 EXOSC4Q9NPD3 245 aaKnown RBP15.83■□□□□ 0.12
SYNE4-202ENST00000340477 hCG_1809904A0A1W2PP81 198 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 A0A1W2PPE2 198 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 A0A1W2PR64 198 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 A0A1W2PRV1 198 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 TRIM77I1YAP6 450 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 M0R1W7 72 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 SH2D1BO14796 132 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 ALDOBP05062 364 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 GABRR1P24046 479 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 SNU13P55769 128 aaKnown RBP15.82■□□□□ 0.12
SYNE4-202ENST00000340477 ACSM1Q08AH1 577 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 ZNF529Q6P280 563 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 C9orf139Q6ZV77 190 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 OR51A2Q8NGJ7 313 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 LHX4Q969G2 390 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 OR14A2Q96R54 314 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 DUSP21Q9H596 190 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 SEBOXQ9HB31 216 aaPredicted RBP15.82■□□□□ 0.12
SYNE4-202ENST00000340477 HMG20AQ9NP66 347 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 PAK1IP1Q9NWT1 392 aaPredicted RBP15.82■□□□□ 0.12
SYNE4-202ENST00000340477 GSTK1Q9Y2Q3 226 aa15.82■□□□□ 0.12
SYNE4-202ENST00000340477 K7N7A8 449 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 FSTP19883 344 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 CRHBPP24387 322 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 ZNF93P35789 620 aaPredicted RBP15.81■□□□□ 0.12
SYNE4-202ENST00000340477 MTNR1BP49286 362 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 GUCA2AQ02747 115 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 ZNF146Q15072 292 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 RSU1Q15404 277 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 PRSS48Q7RTY5 328 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 OR8H2Q8N162 312 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 MS4A15Q8N5U1 240 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 SIGLECL1Q8N7X8 197 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 PXT1Q8NFP0 134 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 OR52N4Q8NGI2 321 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 ZFAND2BQ8WV99 257 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 UFD1Q92890 307 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 SNX22Q96L94 193 aa15.81■□□□□ 0.12
SYNE4-202ENST00000340477 METTL8Q9H825 291 aaKnown RBP15.81■□□□□ 0.12
SYNE4-202ENST00000340477 GABRPO00591 440 aa15.8■□□□□ 0.12
SYNE4-202ENST00000340477 EDDM3BP56851 147 aa15.8■□□□□ 0.12
SYNE4-202ENST00000340477 ZP1P60852 638 aa15.8■□□□□ 0.12
SYNE4-202ENST00000340477 NCR3LG1Q68D85 454 aa15.8■□□□□ 0.12
SYNE4-202ENST00000340477 BRD3OSQ6XYD6 125 aa15.8■□□□□ 0.12
SYNE4-202ENST00000340477 C1orf122Q6ZSJ8 110 aa15.8■□□□□ 0.12
SYNE4-202ENST00000340477 ZMAT3Q9HA38 289 aaKnown RBP15.8■□□□□ 0.12
SYNE4-202ENST00000340477 SIRT7Q9NRC8 400 aa15.8■□□□□ 0.12
SYNE4-202ENST00000340477 PCDHB16Q9NRJ7 776 aa15.8■□□□□ 0.12
SYNE4-202ENST00000340477 C19orf12Q9NSK7 152 aa15.8■□□□□ 0.12
SYNE4-202ENST00000340477 IL36RNQ9UBH0 155 aa15.8■□□□□ 0.12
SYNE4-202ENST00000340477 IGHV1-69DA0A0B4J2H0 117 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 IGKV1-12A0A0C4DH73 117 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 CENPVL3A0A0U1RRI6 287 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 VENTXO95231 258 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 IGKV1D-12P01611 117 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 IGHV1-69P01742 117 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 HSMCR30P0CW71 290 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 CALCBP10092 127 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 ZNF44P15621 663 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 DUSP1P28562 367 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 TGFBR2P37173 567 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 RPS11P62280 158 aaKnown RBP eCLIP15.79■□□□□ 0.12
SYNE4-202ENST00000340477 SRSF2Q01130 221 aaKnown RBP15.79■□□□□ 0.12
SYNE4-202ENST00000340477 IRF3Q14653 427 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 GRK1Q15835 563 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 CHST4Q8NCG5 386 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 OR4M1Q8NGD0 313 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 ZDHHC16Q969W1 377 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 DERL3Q96Q80 235 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 OR5M11Q96RB7 305 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 MDFIQ99750 246 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 TMED9Q9BVK6 235 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 FOXJ3Q9UPW0 622 aa15.79■□□□□ 0.12
SYNE4-202ENST00000340477 LSM2Q9Y333 95 aaKnown RBP15.79■□□□□ 0.12
SYNE4-202ENST00000340477 TRBV5-7A0A0A0MS05 114 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 A0A1W2PPK0 400 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 FUOMA2VDF0 154 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 SIRPB1O00241 398 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 ZNF737O75373 536 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 GPX5O75715 221 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 CSTBP04080 98 aaKnown RBP15.78■□□□□ 0.12
SYNE4-202ENST00000340477 IGFBP3P17936 291 aaPredicted RBP15.78■□□□□ 0.12
SYNE4-202ENST00000340477 BAMBIQ13145 260 aa15.78■□□□□ 0.12
SYNE4-202ENST00000340477 GPR50Q13585 617 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms