RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 KCNAB3O43448 404 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 ALX3O95076 343 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 IGHV1-8P0DP01 117 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 PIPP12273 146 aaPredicted RBP14.38□□□□□ -0.11
HDDC3-201ENST00000330334 ZNF20P17024 532 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 COX7A1P24310 79 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 AZGP1P25311 298 aaKnown RBP14.38□□□□□ -0.11
HDDC3-201ENST00000330334 PEX2P28328 305 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 ERP29P30040 261 aaKnown RBP14.38□□□□□ -0.11
HDDC3-201ENST00000330334 NPBWR2P48146 333 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 BMXP51813 675 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 EDDM3BP56851 147 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 ZNF91Q05481 1191 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 MRPL28Q13084 256 aaKnown RBP14.38□□□□□ -0.11
HDDC3-201ENST00000330334 GALEQ14376 348 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 ZNF626Q68DY1 528 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 SYS1Q8N2H4 156 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 FOXRED1Q96CU9 486 aaPredicted RBP14.38□□□□□ -0.11
HDDC3-201ENST00000330334 LGALS12Q96DT0 336 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 ZNF714Q96N38 554 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 C9orf16Q9BUW7 83 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 INPP5EQ9NRR6 644 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 GLS2Q9UI32 602 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 GMPPBQ9Y5P6 360 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 LINC00312Q9Y6C7 94 aa14.38□□□□□ -0.11
HDDC3-201ENST00000330334 J3QLW9 94 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 ZNF19P17023 458 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 EFNB2P52799 333 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 ALKBH1Q13686 389 aaKnown RBP14.37□□□□□ -0.11
HDDC3-201ENST00000330334 ZNF782Q6ZMW2 699 aaPredicted RBP14.37□□□□□ -0.11
HDDC3-201ENST00000330334 TCF23Q7RTU1 214 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 SAXO1Q8IYX7 474 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 OR52N4Q8NGI2 321 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 OR4C13Q8NGP0 309 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 C4orf36Q96KX1 117 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 OPALINQ96PE5 141 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 NEK6Q9HC98 313 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 HMG20AQ9NP66 347 aa14.37□□□□□ -0.11
HDDC3-201ENST00000330334 MRPS18AQ9NVS2 196 aaKnown RBP14.37□□□□□ -0.11
HDDC3-201ENST00000330334 RBFOX1Q9NWB1 397 aaKnown RBP14.37□□□□□ -0.11
HDDC3-201ENST00000330334 MGST3O14880 152 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 PSPNO60542 156 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 FADS2O95864 444 aaKnown RBP14.36□□□□□ -0.11
HDDC3-201ENST00000330334 IGHA1P01876 353 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 DBTP11182 482 aaKnown RBP14.36□□□□□ -0.11
HDDC3-201ENST00000330334 BCL3P20749 454 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 LMO1P25800 156 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 DYNLT3P51808 116 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 RAB40BQ12829 278 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 GRK1Q15835 563 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 LY6EQ16553 131 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 LHFPL4Q7Z7J7 247 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 HAVCR2Q8TDQ0 301 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 ZNF649Q9BS31 505 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 NPFFR1Q9GZQ6 430 aa14.36□□□□□ -0.11
HDDC3-201ENST00000330334 SH2D1BO14796 132 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 KDM4BO94953 1096 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 INMTO95050 263 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 ARG1P05089 322 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 GABRR1P24046 479 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 POU3F4P49335 361 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 DEFA6Q01524 100 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 C2orf68Q2NKX9 166 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 MINOS1Q5TGZ0 78 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 ZBTB49Q6ZSB9 765 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 ZNF676Q8N7Q3 588 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 OR51A4Q8NGJ6 313 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 OR5D14Q8NGL3 314 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 OR13C3Q8NGS6 347 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 OR10AC1Q8NH08 325 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 OR2T6Q8NHC8 308 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 SLC29A1Q99808 456 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 ALG8Q9BVK2 526 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 S100A14Q9HCY8 104 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 IL36RNQ9UBH0 155 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 UBE2J1Q9Y385 318 aaPredicted RBP14.35□□□□□ -0.11
HDDC3-201ENST00000330334 MINOS1-NBL1R4GNA1 71 aa14.35□□□□□ -0.11
HDDC3-201ENST00000330334 LOC100130705A0A1B0GUX0 176 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 MEGF11A6BM72 1044 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 TMEM212A6NML5 194 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 OCM2P0CE71 109 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 OCMP0CE72 109 aaPredicted RBP14.34□□□□□ -0.11
HDDC3-201ENST00000330334 PRKACAP17612 351 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 PAX6P26367 422 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 OR3A1P47881 315 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 EDDM3AQ14507 147 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 HERPUD1Q15011 391 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 LHFPL3Q86UP9 236 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 SERPINA12Q8IW75 414 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 DYNAPQ8N1N2 210 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 Q8N2B8 174 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 PARP16Q8N5Y8 322 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 OR4S1Q8NGB4 309 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 RPS4Y2Q8TD47 263 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 CFHR4Q92496 578 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 CORO2AQ92828 525 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 COMMD4Q9H0A8 199 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 ZCCHC4Q9H5U6 513 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 ERVK13-1Q9NX77 482 aa14.34□□□□□ -0.11
HDDC3-201ENST00000330334 AASSQ9UDR5 926 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms