RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 A0A1W2PR80 420 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 MMP7P09237 267 aaPredicted RBP9.98□□□□□ -0.81
PTPN2-201ENST00000309660 IL32P24001 234 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 HERV-K104P61576 105 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 HES3Q5TGS1 186 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 GGNBP1Q5YKI7 109 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 RPL7L1Q6DKI1 246 aaKnown RBP9.98□□□□□ -0.81
PTPN2-201ENST00000309660 LRRC46Q96FV0 321 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 ZNF286AQ9HBT8 521 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.98□□□□□ -0.81
PTPN2-201ENST00000309660 ARGFXA6NJG6 315 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 PET100P0DJ07 73 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 NME2P22392 152 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 GLP1RP43220 463 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 CLDN18P56856 261 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 PRDX4Q13162 271 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 IGSF11Q5DX21 431 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 TREM1Q9NP99 234 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 MED9Q9NWA0 146 aa9.98□□□□□ -0.81
PTPN2-201ENST00000309660 SPTBN2O15020 2390 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 F8VVB4 439 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 F8VWA3 439 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 K7EPK0 472 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 CD59P13987 128 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 BCL3P20749 454 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 MEOX1P50221 254 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 HIKESHIQ53FT3 197 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.97□□□□□ -0.81
PTPN2-201ENST00000309660 FAM71E2Q8N5Q1 922 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 POC1AQ8NBT0 407 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 ZNF488Q96MN9 340 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 HS3ST6Q96QI5 342 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 DDA1Q9BW61 102 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 STARD10Q9Y365 291 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 CEACAM18A8MTB9 384 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 PHF1O43189 567 aaPredicted RBP9.97□□□□□ -0.81
PTPN2-201ENST00000309660 PDCD6O75340 191 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 SMUG1Q53HV7 270 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 NUFIP2Q7Z417 695 aaKnown RBP9.97□□□□□ -0.81
PTPN2-201ENST00000309660 LYZL2Q7Z4W2 148 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 CCDC54Q8NEL0 328 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 MARC2Q969Z3 335 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 NTNG2Q96CW9 530 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 ADAT1Q9BUB4 502 aaKnown RBP9.97□□□□□ -0.81
PTPN2-201ENST00000309660 RGCCQ9H4X1 137 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 C12orf4Q9NQ89 552 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 LIPGQ9Y5X9 500 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 CEP250Q9BV73 2442 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 PCSK5Q92824 1860 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 KIAA1549Q9HCM3 1950 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 CACNA1GO43497 2377 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 ZNF732B4DXR9 585 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 PLP2Q04941 152 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 SECTM1Q8WVN6 248 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 PHYHIPLQ96FC7 376 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 HIST1H2AAQ96QV6 131 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 TSNAXQ99598 290 aaKnown RBP9.97□□□□□ -0.81
PTPN2-201ENST00000309660 SHARPINQ9H0F6 387 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 PRSS50Q9UI38 385 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 EDARQ9UNE0 448 aa9.97□□□□□ -0.81
PTPN2-201ENST00000309660 RIF1Q5UIP0 2472 aaKnown RBP9.96□□□□□ -0.81
PTPN2-201ENST00000309660 CDX4O14627 284 aaPredicted RBP9.96□□□□□ -0.81
PTPN2-201ENST00000309660 LRP3O75074 770 aa9.96□□□□□ -0.81
PTPN2-201ENST00000309660 CTSDP07339 412 aaPredicted RBP9.96□□□□□ -0.81
PTPN2-201ENST00000309660 RBM11P57052 281 aaKnown RBP9.96□□□□□ -0.81
PTPN2-201ENST00000309660 HAGHLQ6PII5 290 aaPredicted RBP9.96□□□□□ -0.81
PTPN2-201ENST00000309660 CCDC36Q8IYA8 594 aa9.96□□□□□ -0.81
PTPN2-201ENST00000309660 SUMF1Q8NBK3 374 aa9.96□□□□□ -0.81
PTPN2-201ENST00000309660 RNF141Q8WVD5 230 aa9.96□□□□□ -0.81
PTPN2-201ENST00000309660 EXTL1Q92935 676 aa9.96□□□□□ -0.81
PTPN2-201ENST00000309660 BARX1Q9HBU1 254 aaPredicted RBP9.96□□□□□ -0.81
PTPN2-201ENST00000309660 SLC2A9Q9NRM0 540 aa9.96□□□□□ -0.81
PTPN2-201ENST00000309660 FUT3P21217 361 aa9.96□□□□□ -0.82
PTPN2-201ENST00000309660 RPL12P30050 165 aaKnown RBP9.96□□□□□ -0.82
PTPN2-201ENST00000309660 ARG2P78540 354 aa9.96□□□□□ -0.82
PTPN2-201ENST00000309660 SURF2Q15527 256 aaPredicted RBP9.96□□□□□ -0.82
PTPN2-201ENST00000309660 OR8B8Q15620 311 aa9.96□□□□□ -0.82
PTPN2-201ENST00000309660 TSC22D1Q15714 1073 aa9.96□□□□□ -0.82
PTPN2-201ENST00000309660 AKIRIN2Q53H80 203 aa9.96□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF552Q9H707 407 aaPredicted RBP9.96□□□□□ -0.82
PTPN2-201ENST00000309660 TAF9BQ9HBM6 251 aa9.96□□□□□ -0.82
PTPN2-201ENST00000309660 LOC105371267A0A1B0GV96 52 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 HS3ST1O14792 307 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 NXPH3O95157 252 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 F12P00748 615 aaPredicted RBP9.95□□□□□ -0.82
PTPN2-201ENST00000309660 AADACP22760 399 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 ASCL1P50553 236 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 SRSF3P84103 164 aaKnown RBP9.95□□□□□ -0.82
PTPN2-201ENST00000309660 PMP22Q01453 160 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 PPA1Q15181 289 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 TMEM42Q69YG0 159 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 CYTL1Q9NRR1 136 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 FAM96BQ9Y3D0 163 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 PRR14LQ5THK1 2151 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 CRYM-AS1A6NIL9 109 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 GPR31O00270 319 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 MED6O75586 246 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 ZNF708P17019 499 aa9.95□□□□□ -0.82
PTPN2-201ENST00000309660 EIF3IQ13347 325 aaKnown RBP9.95□□□□□ -0.82
PTPN2-201ENST00000309660 TMEM88Q6PEY1 159 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms