RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 ZNF43P17038 809 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 RABIFP47224 123 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 TMEM187Q14656 261 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 FAM189A2Q15884 450 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 CMTM1Q8IZ96 169 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 LGI3Q8N145 548 aa12.81□□□□□ -0.36
COL6A2-201ENST00000300527 RBM24Q9BX46 236 aaKnown RBP12.81□□□□□ -0.36
COL6A2-201ENST00000300527 IGSF23A1L1A6 192 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 LINC01565O15544 149 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 SRP19P09132 144 aaKnown RBP12.8□□□□□ -0.36
COL6A2-201ENST00000300527 GNRHRP30968 328 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 CAPZBP47756 277 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 ZNF41P51814 821 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-201ENST00000300527 SMAD4Q13485 552 aaKnown RBP12.8□□□□□ -0.36
COL6A2-201ENST00000300527 MPV17LQ2QL34 196 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 DTX1Q86Y01 620 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 OR5T1Q8NG75 326 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 HPSE2Q8WWQ2 592 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 LRRC61Q9BV99 259 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 SDHAF3Q9NRP4 125 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 NECAP2Q9NVZ3 263 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 LRFN1Q9P244 771 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 IGHV3-15A0A0B4J1V0 119 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 ZNF814B7Z6K7 855 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 HSPB6O14558 160 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 HSPA12AO43301 675 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 SOX15O60248 233 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 OR2J2O76002 312 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 IGHMP01871 453 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 NKX2-1P43699 371 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-201ENST00000300527 CLDN17P56750 224 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 PIGYQ3MUY2 71 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 CXorf66Q5JRM2 361 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-201ENST00000300527 FAM69BQ5VUD6 431 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 WDR25Q64LD2 544 aaPredicted RBP12.8□□□□□ -0.36
COL6A2-201ENST00000300527 FIP1L1Q6UN15 594 aaKnown RBP12.8□□□□□ -0.36
COL6A2-201ENST00000300527 WFIKKN1Q96NZ8 548 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 NKX2-4Q9H2Z4 354 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 PISDQ9UG56 409 aa12.8□□□□□ -0.36
COL6A2-201ENST00000300527 SPINK2P20155 84 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 PKIAP61925 76 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 YPEL5P62699 121 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 ZNF154Q13106 437 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 HIKESHIQ53FT3 197 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 LIAT1Q6ZQX7 453 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 ZNF695Q8IW36 515 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 WNT16Q9UBV4 365 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 ZNHIT1O43257 154 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 DYNLT3P51808 116 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 MRPS34P82930 218 aaKnown RBP12.79□□□□□ -0.36
COL6A2-201ENST00000300527 GPR157Q5UAW9 335 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 RHBDD1Q8TEB9 315 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 ABHD5Q8WTS1 349 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 LYZL4Q96KX0 146 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 ZNF442Q9H7R0 627 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 PLEK2Q9NYT0 353 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 FBLN5Q9UBX5 448 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 DOCK8Q8NF50 2099 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 LIPT2A6NK58 231 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 TERTO14746 1132 aaKnown RBP12.79□□□□□ -0.36
COL6A2-201ENST00000300527 TCAPO15273 167 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 IFNA10P01566 189 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 FUT3P21217 361 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 TNFRSF4P43489 277 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 C21orf62-AS1Q17RA5 79 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 THEM4Q5T1C6 240 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 C1QL4Q86Z23 238 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 C1orf87Q8N0U7 546 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 NOXO1Q8NFA2 376 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 TP53RKQ96S44 253 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 ANAPC10Q9UM13 185 aa12.79□□□□□ -0.36
COL6A2-201ENST00000300527 BLACEA4D250 179 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 IL2RGP31785 369 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 CTHP32929 405 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 DCAF7P61962 342 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 THNSL2Q86YJ6 484 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 OR1N1Q8NGS0 311 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 NAT6Q93015 286 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 CPNE4Q96A23 557 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-201ENST00000300527 KLHDC7BQ96G42 594 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 GABRG3Q99928 467 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 METTL7AQ9H8H3 244 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 PRUNE2Q8WUY3 3088 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 A0A1W2PR80 420 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 MMP7P09237 267 aaPredicted RBP12.78□□□□□ -0.36
COL6A2-201ENST00000300527 ZNF266Q14584 549 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 TMEM171Q8WVE6 324 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 NUDT16L1Q9BRJ7 211 aaKnown RBP12.78□□□□□ -0.36
COL6A2-201ENST00000300527 CFAP54Q96N23 3096 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 SPTY2D1-AS1A0A0U1RR47 76 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 PTBP3O95758 552 aaKnown RBP12.78□□□□□ -0.36
COL6A2-201ENST00000300527 APLNRP35414 380 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 CD200P41217 278 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 ICAM4Q14773 271 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 OR8G1Q15617 311 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 PRAMEF20Q5VT98 475 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 SPSB3Q6PJ21 355 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 SYT3Q9BQG1 590 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 CABLES2Q9BTV7 478 aa12.78□□□□□ -0.36
COL6A2-201ENST00000300527 FOXD3Q9UJU5 478 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms