RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 KIR2DS5A0A0G2JLQ3 304 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 A0A0G2JNG1 304 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 A0A1B0GU03 582 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 TMEM238LA0A1B0GVL6 79 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 FAM24AA6NFZ4 105 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 ZNF732B4DXR9 585 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 CLDN34H7C241 214 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 KIR2DS3K7RE56 304 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 ATXN7O15265 892 aaPredicted RBP11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 BIDP55957 195 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 KIR2DS5Q14953 304 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 DMRTC1Q5HYR2 192 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 FGF14Q92915 247 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 EMC6Q9BV81 110 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 GPR87Q9BY21 358 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 CHST11Q9NPF2 352 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 PNRC2Q9NPJ4 139 aaKnown RBP11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 SLC2A9Q9NRM0 540 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 GAB2Q9UQC2 676 aa11.78□□□□□ -0.52
RPUSD4-201ENST00000298317 CYB5R3P00387 301 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 FOLR1P15328 257 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 TDGF1P3P51864 188 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 ZNF133P52736 654 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 H3F3AP84243 136 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 TLE3Q04726 772 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 PNRC1Q12796 327 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 FOXF1Q12946 379 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 SLC10A1Q14973 349 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 DCAF10Q5QP82 559 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 ABLIM2Q6H8Q1 611 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 D2HGDHQ8N465 521 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 TSLPQ969D9 159 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 SYT3Q9BQG1 590 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 TMEM106CQ9BVX2 250 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 MRPL13Q9BYD1 178 aaKnown RBP11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 OR51B6Q9H340 312 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 NECAP2Q9NVZ3 263 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 DKKL1Q9UK85 242 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 UNC80Q8N2C7 3258 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 LOC102723971A0A1B0GUV8 181 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 HSPA12AO43301 675 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 CELA2BP08218 269 aaPredicted RBP11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 PNLIPP16233 465 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 HNRNPA2B1P22626 353 aaKnown RBP11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 FAM90A2PQ658T7 463 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 OR2AJ1Q8NGZ0 328 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 PLEKHJ1Q9NW61 149 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 OR14J1Q9UGF5 321 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 POLR1DQ9Y2S0 133 aa11.77□□□□□ -0.53
RPUSD4-201ENST00000298317 ATG2BQ96BY7 2078 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 GEMIN2O14893 280 aaKnown RBP11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 HBE1P02100 147 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 AKT2P31751 481 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 OR1D4P47884 311 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 NOVA1P51513 510 aaKnown RBP11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 RPL23AP62750 156 aaKnown RBP11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 TAF9Q16594 264 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 PHLDA2Q53GA4 152 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 TMEM196Q5HYL7 178 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 FAM57BQ71RH2 274 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 RABEPKQ7Z6M1 372 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 OR5L1Q8NGL2 311 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 NPRL2Q8WTW4 380 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 NXT1Q9UKK6 140 aaKnown RBP11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 COL5A1P20908 1838 aaPredicted RBP11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 IGKV3D-11A0A0A0MRZ8 115 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 E9PLN8 166 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 SEMA4FO95754 770 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 IGLV3-1P01715 115 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 METTL15P1P0C7V9 234 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 ATXN8OSP0DMR3 200 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 GABRR1P24046 479 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 HHEXQ03014 270 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 COA6Q5JTJ3 125 aaKnown RBP11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 SLC35G3Q8N808 338 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 OR4X1Q8NH49 305 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 GNPNAT1Q96EK6 184 aaPredicted RBP11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 Q96M66 194 aa11.76□□□□□ -0.53
RPUSD4-201ENST00000298317 ADAMTS9Q9P2N4 1935 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 A0A1W2PNV4 684 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 TMEM150CB9EJG8 249 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 M0R143 59 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 GLI4P10075 376 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 CEACAM1P13688 526 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 COL9A1P20849 921 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 APLNRP35414 380 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 ZFP36L1Q07352 338 aaKnown RBP11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 HLA-DQA1Q5Y7H0 255 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 DPPA3Q6W0C5 159 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 SPRED2Q7Z698 418 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 TMEM234Q8WY98 164 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 DNASE2BQ8WZ79 361 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 LIN37Q96GY3 246 aaPredicted RBP11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 WWTR1Q9GZV5 400 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 PLEKHF2Q9H8W4 249 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 CALHM2Q9HA72 323 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 SERINC1Q9NRX5 453 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 LYRM2Q9NU23 88 aaPredicted RBP11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 B3GAT1Q9P2W7 334 aa11.75□□□□□ -0.53
RPUSD4-201ENST00000298317 ZNF850A8MQ14 1090 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms