RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CLPPQ16740 277 aaPredicted RBP15.27■□□□□ 0.04
SHANK1-201ENST00000293441 GRAMD2BQ96HH9 432 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 MBD1Q9UIS9 605 aaPredicted RBP15.27■□□□□ 0.04
SHANK1-201ENST00000293441 A0A1W2PPV9 198 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 IGHV4-34P06331 123 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 ZNF528Q3MIS6 628 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 PMS2CLQ68D20 193 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 SFTPA2Q8IWL1 248 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 SLC25A22Q9H936 323 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 TINAGQ9UJW2 476 aa15.27■□□□□ 0.04
SHANK1-201ENST00000293441 A0A1W2PPQ1 181 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 OR2B8PP59922 312 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 HLXQ14774 488 aaPredicted RBP15.27■□□□□ 0.03
SHANK1-201ENST00000293441 THYN1Q9P016 225 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 IGHV3OR15-7A0A075B7D8 119 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 TCAPO15273 167 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 HAND1O96004 215 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 LGALS7P47929 136 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 OR8D4Q8NGM9 314 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 MIA3Q5JRA6 1907 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 SP1P08047 785 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 OR5AC1P0C628 307 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 PNLIPP16233 465 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 PEBP1P30086 187 aaKnown RBP15.27■□□□□ 0.03
SHANK1-201ENST00000293441 CTF1Q16619 201 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 GVQW1Q8N7I0 195 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 OR2M3Q8NG83 312 aa15.27■□□□□ 0.03
SHANK1-201ENST00000293441 SHANK3Q9BYB0 1731 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 CST2P09228 141 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 ANKRD34CP0C6C1 535 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 SP7Q8TDD2 431 aaPredicted RBP15.26■□□□□ 0.03
SHANK1-201ENST00000293441 CDIPTO14735 213 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 ACSM4P0C7M7 580 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 C11orf42Q8N5U0 333 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 ZMIZ1Q9ULJ6 1067 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 SFT2D2O95562 160 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 PGA3P0DJD8 388 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 ORM2P19652 201 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 FOXB2Q5VYV0 432 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 DHRS7BQ6IAN0 325 aaPredicted RBP15.26■□□□□ 0.03
SHANK1-201ENST00000293441 ZNF574Q6ZN55 896 aaPredicted RBP15.26■□□□□ 0.03
SHANK1-201ENST00000293441 PIK3IP1Q96FE7 263 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 CXorf58Q96LI9 332 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 PLAC1Q9HBJ0 212 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 GPR35Q9HC97 309 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 RASL12Q9NYN1 266 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 MRM2Q9UI43 246 aaKnown RBP15.26■□□□□ 0.03
SHANK1-201ENST00000293441 ATAD5Q96QE3 1844 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 F5H697 171 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 MS4A18H0YCH9 400 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 SPP1P10451 314 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 SFTPCP11686 197 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 MS4A18Q3C1V0 323 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 RASL11BQ9BPW5 248 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 F5P12259 2224 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 LIFP15018 202 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 BRS3P32247 399 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 PPP1R1AQ13522 171 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 TGIF2Q9GZN2 237 aa15.26■□□□□ 0.03
SHANK1-201ENST00000293441 THSD7AQ9UPZ6 1657 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 PAX5Q02548 391 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 ISXQ2M1V0 245 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 MRM1Q6IN84 353 aaKnown RBP15.25■□□□□ 0.03
SHANK1-201ENST00000293441 C9orf40Q8IXQ3 194 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 NAA60Q9H7X0 242 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 IGHA1P01876 353 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 IGHA2P01877 340 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 GP1BAP07359 652 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 OOEPA6NGQ2 149 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 NDUFB6O95139 128 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 OR1B1Q8NGR6 318 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 TTTY12Q9BZ98 90 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 DLEC1Q9Y238 1755 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 C9orf170A2RU37 121 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 MRPS11P82912 194 aaKnown RBP15.25■□□□□ 0.03
SHANK1-201ENST00000293441 GAMTQ14353 236 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 CD300LDQ6UXZ3 194 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 OR10AC1Q8NH08 325 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 OR2H1Q9GZK4 316 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 WDR61Q9GZS3 305 aaKnown RBP15.25■□□□□ 0.03
SHANK1-201ENST00000293441 WDR13Q9H1Z4 485 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 RPS4XP62701 263 aaKnown RBP15.25■□□□□ 0.03
SHANK1-201ENST00000293441 ETV3LQ6ZN32 361 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 SLC16A12Q6ZSM3 486 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 C10orf90Q96M02 699 aa15.25■□□□□ 0.03
SHANK1-201ENST00000293441 TDRD15B5MCY1 1934 aaKnown RBP15.25■□□□□ 0.03
SHANK1-201ENST00000293441 C16orf97H3BN30 126 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 FTH1P19P0C7X4 201 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 ZAR1Q86SH2 424 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 OR52L2PQ8NGH6 319 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 SLC25A40Q8TBP6 338 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 OIT3Q8WWZ8 545 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 ASB13Q8WXK3 278 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 MED30Q96HR3 178 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 WDR54Q9H977 334 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 RNF7Q9UBF6 113 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 PJVKQ0ZLH3 352 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 OR4D11Q8NGI4 311 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 RAB40CQ96S21 281 aa15.24■□□□□ 0.03
SHANK1-201ENST00000293441 ZDHHC11Q9H8X9 412 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms