RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 ASPMQ8IZT6 3477 aa15.83■□□□□ 0.12
SHKBP1-201ENST00000291842 NGFP01138 241 aa15.83■□□□□ 0.12
SHKBP1-201ENST00000291842 OR5AC1P0C628 307 aa15.83■□□□□ 0.12
SHKBP1-201ENST00000291842 GPM6AP51674 278 aa15.83■□□□□ 0.12
SHKBP1-201ENST00000291842 ABCA11PQ4W5N1 156 aa15.83■□□□□ 0.12
SHKBP1-201ENST00000291842 DHRS11Q6UWP2 260 aa15.83■□□□□ 0.12
SHKBP1-201ENST00000291842 SLC30A7Q8NEW0 376 aa15.83■□□□□ 0.12
SHKBP1-201ENST00000291842 ADAMTS17Q8TE56 1095 aa15.83■□□□□ 0.12
SHKBP1-201ENST00000291842 SLAMF9Q96A28 289 aa15.83■□□□□ 0.12
SHKBP1-201ENST00000291842 FGF23Q9GZV9 251 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-201ENST00000291842 C21orf140B9A014 251 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 LINC01387J3KSC0 135 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 PDCD6O75340 191 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 TNFSF15O95150 251 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 ECI1P42126 302 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 SPEM2Q0P670 501 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 COLCA1Q6ZS62 124 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 OR5L1Q8NGL2 311 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 OR11L1Q8NGX0 322 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 MARC2Q969Z3 335 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 AQP10Q96PS8 301 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 SLC5A7Q9GZV3 580 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 DECR2Q9NUI1 292 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 LSM5Q9Y4Y9 91 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 BCL3P20749 454 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 HAAOP46952 286 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 PRDX4Q13162 271 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 SMUG1Q53HV7 270 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 NUFIP2Q7Z417 695 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 RTN4IP1Q8WWV3 396 aaPredicted RBP15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 LINC00470Q9BZP3 86 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 OR51B6Q9H340 312 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 RYDENQ9NUL5 291 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 IL36GQ9NZH8 169 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 IL36RNQ9UBH0 155 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 MEMO1Q9Y316 297 aa15.82■□□□□ 0.12
SHKBP1-201ENST00000291842 HSPB6O14558 160 aa15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 PET100P0DJ07 73 aa15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 RCC1P18754 421 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 ATF4P18848 351 aaPredicted RBP15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 MEOX1P50221 254 aa15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 RPL7L1Q6DKI1 246 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 APH1AQ96BI3 265 aa15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 CNTNAP3BQ96NU0 1288 aa15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 REPIN1Q9BWE0 567 aaKnown RBP15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 CNTNAP3Q9BZ76 1288 aa15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 C12orf49Q9H741 205 aa15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 STARD10Q9Y365 291 aa15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 LIPGQ9Y5X9 500 aa15.81■□□□□ 0.12
SHKBP1-201ENST00000291842 C3orf80F5H4A9 247 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 FGF16O43320 207 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 HKR1P10072 659 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 FUT3P21217 361 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 NOVA1P51513 510 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 RAB1AP62820 205 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 CLEC9AQ6UXN8 241 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 TFAP2EQ6VUC0 442 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 MRPL21Q7Z2W9 205 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 OR5T2Q8NGG2 359 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 LRRC46Q96FV0 321 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 ZNF286AQ9HBT8 521 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 IFNA21P01568 189 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 SRSF3P84103 164 aaKnown RBP15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 NAAAQ02083 359 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 IGSF11Q5DX21 431 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 PLA2G2CQ5R387 149 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 HES3Q5TGS1 186 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 HPSE2Q8WWQ2 592 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 SMIM3Q9BZL3 60 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 DEFB127Q9H1M4 99 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 PIGMQ9H3S5 423 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 C12orf4Q9NQ89 552 aa15.8■□□□□ 0.12
SHKBP1-201ENST00000291842 SP1P08047 785 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 DUSP1P28562 367 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 TAGLNQ01995 201 aaKnown RBP15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 NRN1LQ496H8 165 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 LYZL2Q7Z4W2 148 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 VASH2Q86V25 355 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 RNF141Q8WVD5 230 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 WNT2BQ93097 391 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 NAA60Q9H7X0 242 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 SLC2A9Q9NRM0 540 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 PRSS50Q9UI38 385 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 KCNIP3Q9Y2W7 256 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 PQLC2LA1A4F0 135 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 ACTL6AO96019 429 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 FAM157CP0CG43 387 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 TMEM187Q14656 261 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 IL22RA1Q8N6P7 574 aa15.79■□□□□ 0.12
SHKBP1-201ENST00000291842 ZNF705EA8MWA4 302 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 RPL36A-HNRNPH2H7BZ11 118 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 AADACP22760 399 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 RPL12P30050 165 aaKnown RBP15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 HIKESHIQ53FT3 197 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 MCEMP1Q8IX19 187 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 TECTBQ96PL2 329 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 ZNF552Q9H707 407 aaPredicted RBP15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 TMEM100Q9NV29 134 aa15.78■□□□□ 0.12
SHKBP1-201ENST00000291842 DNAJB11Q9UBS4 358 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms