RNA–Protein interactions for RNA: ENST00000268673.11

PDPK1-201, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene PDPK1, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-201ENST00000268673 LIMK1P53667 647 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 HIST1H3AP68431 136 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 PMS2P11Q13670 270 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 SLC10A1Q14973 349 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 FAM58AQ8N1B3 248 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 TMEM52Q8NDY8 209 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 SLC26A10Q8NG04 563 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 OR10A7Q8NGE5 316 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 OR8B12Q8NGG6 310 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 SNX22Q96L94 193 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 AUP1Q9Y679 476 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 A0A1W2PQD3 144 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 TNFSF15O95150 251 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 CCKARP32238 428 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 CLDN15P56746 228 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 RPS11P62280 158 aaKnown RBP eCLIP13.1□□□□□ -0.31
PDPK1-201ENST00000268673 BATF2Q8N1L9 274 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 CTDSP1Q9GZU7 261 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 HEYLQ9NQ87 328 aaPredicted RBP13.1□□□□□ -0.31
PDPK1-201ENST00000268673 GSN-AS1Q9NRJ2 163 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 MAP1LC3B2A6NCE7 125 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 WDR1O75083 606 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 EDN3P14138 238 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 DTYMKP23919 212 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 DHRS11Q6UWP2 260 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 SFTPA1Q8IWL2 248 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 OR4A16Q8NH70 328 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 MAP1LC3BQ9GZQ8 125 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 KIAA1456Q9P272 454 aa13.1□□□□□ -0.31
PDPK1-201ENST00000268673 ADAM11O75078 769 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 IGKV1D-16P01601 117 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 NGFRP08138 427 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 POLR2GP62487 172 aaKnown RBP eCLIP13.09□□□□□ -0.31
PDPK1-201ENST00000268673 EXTL1Q92935 676 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 CIB3Q96Q77 187 aaPredicted RBP13.09□□□□□ -0.31
PDPK1-201ENST00000268673 SPTBN2O15020 2390 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 OTOL1A6NHN0 477 aaPredicted RBP13.09□□□□□ -0.31
PDPK1-201ENST00000268673 GALNSP34059 522 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 HFEQ30201 348 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 H2BFWTQ7Z2G1 175 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 LANCL2Q9NS86 450 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 ANKRD36A6QL64 1941 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 CEP250Q9BV73 2442 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 ZNF816-ZNF321PA0A0X1KG74 233 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 CLEC18AA5D8T8 446 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 NPIPB9F8W1W9 429 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 HRKO00198 91 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 HS3ST1O14792 307 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 CDS2O95674 445 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 PHYHD1Q5SRE7 291 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 FDX2Q6P4F2 183 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 CLEC18CQ8NCF0 446 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 ADAT3Q96EY9 351 aaPredicted RBP13.09□□□□□ -0.31
PDPK1-201ENST00000268673 REG4Q9BYZ8 158 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 Q9N2K0 584 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 TRAPPC1Q9Y5R8 145 aa13.09□□□□□ -0.31
PDPK1-201ENST00000268673 C4orf51C9J302 202 aa13.08□□□□□ -0.31
PDPK1-201ENST00000268673 J3QRE1 110 aa13.08□□□□□ -0.31
PDPK1-201ENST00000268673 EWSR1Q01844 656 aaKnown RBP eCLIP13.08□□□□□ -0.311e-6■■■■□ 24.6
PDPK1-201ENST00000268673 GPBAR1Q8TDU6 330 aa13.08□□□□□ -0.31
PDPK1-201ENST00000268673 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.08□□□□□ -0.31
PDPK1-201ENST00000268673 MS4A10Q96PG2 267 aa13.08□□□□□ -0.31
PDPK1-201ENST00000268673 VAMP8Q9BV40 100 aa13.08□□□□□ -0.31
PDPK1-201ENST00000268673 WDR81Q562E7 1941 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 IGHV5-51A0A0C4DH38 117 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 CDX1P47902 265 aaPredicted RBP13.08□□□□□ -0.32
PDPK1-201ENST00000268673 RPL29P47914 159 aaKnown RBP13.08□□□□□ -0.32
PDPK1-201ENST00000268673 SUMO1P63165 101 aaKnown RBP13.08□□□□□ -0.32
PDPK1-201ENST00000268673 TM4SF19Q96DZ7 209 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 AMELYQ99218 206 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 CFHR5Q9BXR6 569 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 FAM60AQ9NP50 221 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 PARD6AQ9NPB6 346 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 NAT8Q9UHE5 227 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 PPP1R3CQ9UQK1 317 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 PDCD6O75340 191 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 DEDDO75618 318 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 FCARP24071 287 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 TOMM20LQ6UXN7 152 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 FAM219AQ8IW50 185 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 KLHDC1Q8N7A1 406 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 GABRG3Q99928 467 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 TRAV14DV4A0A0A6YYC5 116 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 OR8U8P0C7N1 319 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 BSXQ3C1V8 233 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 KHDC3LQ587J8 217 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 ZNF321PQ8N8H1 164 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 RDH5Q92781 318 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 ZNF391Q9UJN7 358 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 UNC13CQ8NB66 2214 aa13.08□□□□□ -0.32
PDPK1-201ENST00000268673 RNF222A6NCQ9 220 aa13.07□□□□□ -0.32
PDPK1-201ENST00000268673 PTGER4P35408 488 aa13.07□□□□□ -0.32
PDPK1-201ENST00000268673 SSX7Q7RTT5 188 aa13.07□□□□□ -0.32
PDPK1-201ENST00000268673 NOL4LQ96MY1 436 aaPredicted RBP13.07□□□□□ -0.32
PDPK1-201ENST00000268673 TAAR9Q96RI9 348 aa13.07□□□□□ -0.32
PDPK1-201ENST00000268673 MASP2O00187 686 aa13.07□□□□□ -0.32
PDPK1-201ENST00000268673 ACTL6AO96019 429 aa13.07□□□□□ -0.32
PDPK1-201ENST00000268673 HKR1P10072 659 aa13.07□□□□□ -0.32
PDPK1-201ENST00000268673 CLN3Q13286 438 aa13.07□□□□□ -0.32
PDPK1-201ENST00000268673 TBC1D28Q2M2D7 210 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms