RNA–Protein interactions for RNA: ENST00000262554.6

SPTLC1-201, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC1, Length 1,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-201ENST00000262554 FGF12P61328 243 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 MRPL49Q13405 166 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 PDCD1Q15116 288 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 ANKRD55Q3KP44 614 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF660Q6AZW8 331 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 ACOT7LQ6ZUV0 252 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 COMMD7Q86VX2 200 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 INO80EQ8NBZ0 244 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 BHLHE23Q8NDY6 225 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 SARAFQ96BY9 339 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF75AQ96N20 296 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 OR51B6Q9H340 312 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 METTL8Q9H825 291 aaKnown RBP11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 PLSCR2Q9NRY7 297 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM86C1Q9NVL1 165 aa11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF629Q9UEG4 869 aaPredicted RBP11.11□□□□□ -0.63
SPTLC1-201ENST00000262554 OR5B21A6NL26 309 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 IFNA2P01563 188 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 CEACAM1P13688 526 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 RPS2P15880 293 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 RBMXP38159 391 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 UBA52P62987 128 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 ATXN7L3Q14CW9 347 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 ALKAL2Q6UX46 152 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM214BQ7L5A3 538 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 SGPP2Q8IWX5 399 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 GCNT2Q8N0V5 402 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 BATF2Q8N1L9 274 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 PRSS33Q8NF86 280 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 OR5P3Q8WZ94 311 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 VRK1Q99986 396 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 TEX13DA0A0J9YY54 714 aaPredicted RBP11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 FAM221AA4D161 298 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 ADAP1O75689 374 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF728P0DKX0 622 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 IGHV1-2P23083 117 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 CALCRP30988 508 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 NOVA1P51513 510 aaKnown RBP11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 MPV17LQ2QL34 196 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF573Q86YE8 665 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 DOCK7Q96N67 2140 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 C1orf123Q9NWV4 160 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 PRR13Q9NZ81 148 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 MBD2Q9UBB5 411 aa11.1□□□□□ -0.63
SPTLC1-201ENST00000262554 BCL2L11O43521 198 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 CEACAM4O75871 244 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 SPDEFO95238 335 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 CNOT4O95628 575 aaKnown RBP11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 RRASP10301 218 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 ZNF14P17017 642 aaPredicted RBP11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 IL32P24001 234 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 PTGER4P35408 488 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 GLP1RP43220 463 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 GNG3P63215 75 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 Q6ZT83 130 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 ZADH2Q8N4Q0 377 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 CNEP1R1Q8N9A8 125 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 EXTL1Q92935 676 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 PLK3Q9H4B4 646 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 CDH20Q9HBT6 801 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 MTCH1Q9NZJ7 389 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 KCNMB2Q9Y691 235 aa11.09□□□□□ -0.63
SPTLC1-201ENST00000262554 RNF222A6NCQ9 220 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 CRYM-AS1A6NIL9 109 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 LYZL6O75951 148 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 FCGR2CP31995 323 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 DAZAP2Q15038 168 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 GUSBP1Q15486 140 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 ABCA11PQ4W5N1 156 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 THOC7Q6I9Y2 204 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 OR2T2Q6IF00 324 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 HAGHLQ6PII5 290 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 LINC00596Q86U02 117 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 OR5M9Q8NGP3 310 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 DCUN1D4Q92564 292 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 TOMM40LQ969M1 308 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 MARS2Q96GW9 593 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 C2orf50Q96LR7 162 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 LIME1Q9H400 295 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 MEMO1Q9Y316 297 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 EP300Q09472 2414 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 F8VVB4 439 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 F8VWA3 439 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 SYNGR1O43759 233 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 LILRA1O75019 489 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 CELA3BP08861 270 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 IDH3GP51553 393 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 PIGPP57054 158 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 RTP5Q14D33 572 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 SPATA46Q5T0L3 261 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 INO80CQ6PI98 192 aaPredicted RBP11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 FBXW12Q6X9E4 464 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 ST8SIA2Q92186 375 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 PIK3IP1Q96FE7 263 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 PKIBQ9C010 78 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 RCC2Q9P258 522 aaKnown RBP11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 KCNIP3Q9Y2W7 256 aa11.08□□□□□ -0.64
SPTLC1-201ENST00000262554 TRBV6-7A0A0A0MS04 114 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 A0A1W2PR80 420 aa11.07□□□□□ -0.64
SPTLC1-201ENST00000262554 POM121CA8CG34 1229 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms