RNA–Protein interactions for RNA: ENST00000253754.7

PDLIM4-201, Transcript of PDZ and LIM domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM4, Length 2,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-201ENST00000253754 DEFB127Q9H1M4 99 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 OR5AC2Q9NZP5 309 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 C14orf166Q9Y224 244 aaKnown RBP16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 RRP8O43159 456 aaKnown RBP16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 ZNF766Q5HY98 468 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 C12orf49Q9H741 205 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 BCO1Q9HAY6 547 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 MED9Q9NWA0 146 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 RASL12Q9NYN1 266 aa16.12■□□□□ 0.17
PDLIM4-201ENST00000253754 MSGN1A6NI15 193 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 RPL36A-HNRNPH2H7BZ11 118 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 NGFP01138 241 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 RNFT1Q5M7Z0 435 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 TOMM40LQ969M1 308 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 SCNM1Q9BWG6 230 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 PRSS50Q9UI38 385 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 CDK2AP1O14519 115 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 TNFSF10P50591 281 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 SURF2Q15527 256 aaPredicted RBP16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 PXT1Q8NFP0 134 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 HS3ST6Q96QI5 342 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 GSKIPQ9P0R6 139 aa16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 ANKRD11Q6UB99 2663 aaPredicted RBP16.11■□□□□ 0.17
PDLIM4-201ENST00000253754 A0A0B4J2A0 478 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 KLK10O43240 276 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 RBM11P57052 281 aaKnown RBP16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 SLC22A25Q6T423 547 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 REPIN1Q9BWE0 567 aaKnown RBP16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 IL36GQ9NZH8 169 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 SHPKQ9UHJ6 478 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 TRBV6-7A0A0A0MS04 114 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 IFNA2P01563 188 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 GPM6AP51674 278 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 RAB1AP62820 205 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 CYCSP99999 105 aaKnown RBP16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 RAB32Q13637 225 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 ZFP62Q8NB50 900 aaPredicted RBP16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 POC1AQ8NBT0 407 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 HPSE2Q8WWQ2 592 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 SLC25A32Q9H2D1 315 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 EDARQ9UNE0 448 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 STARD10Q9Y365 291 aa16.1■□□□□ 0.17
PDLIM4-201ENST00000253754 ZNF724A8MTY0 619 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 A8MXK9 166 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 F8VVB4 439 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 F8VWA3 439 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 OR7C1O76099 320 aaPredicted RBP16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 FGF2P09038 288 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 ZP3P21754 424 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 DTYMKP23919 212 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 FXYD4P59646 89 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 PRDX4Q13162 271 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 TUSC1Q2TAM9 212 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 HIKESHIQ53FT3 197 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 TMEM178AQ8NBL3 297 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 SLAMF9Q96A28 289 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 OR51B6Q9H340 312 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 NECAP2Q9NVZ3 263 aa16.09■□□□□ 0.17
PDLIM4-201ENST00000253754 PDCD6O75340 191 aa16.08■□□□□ 0.17
PDLIM4-201ENST00000253754 BCL3P20749 454 aa16.08■□□□□ 0.17
PDLIM4-201ENST00000253754 SLC10A1Q14973 349 aa16.08■□□□□ 0.17
PDLIM4-201ENST00000253754 MRPL21Q7Z2W9 205 aaKnown RBP16.08■□□□□ 0.17
PDLIM4-201ENST00000253754 FOXRED2Q8IWF2 684 aa16.08■□□□□ 0.17
PDLIM4-201ENST00000253754 MCEMP1Q8IX19 187 aa16.08■□□□□ 0.17
PDLIM4-201ENST00000253754 BVESQ8NE79 360 aa16.08■□□□□ 0.17
PDLIM4-201ENST00000253754 BARX1Q9HBU1 254 aaPredicted RBP16.08■□□□□ 0.17
PDLIM4-201ENST00000253754 SPRR3Q9UBC9 169 aa16.08■□□□□ 0.17
PDLIM4-201ENST00000253754 IL36RNQ9UBH0 155 aa16.08■□□□□ 0.17
PDLIM4-201ENST00000253754 TEX13DA0A0J9YY54 714 aaPredicted RBP16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 B8ZZF3 427 aa16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 CTSDP07339 412 aaPredicted RBP16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 HAAOP46952 286 aa16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 S100A10P60903 97 aa16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 NSUN5P2Q63ZY6 315 aa16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 ELP2Q6IA86 826 aa16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 C5orf24Q7Z6I8 188 aa16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 PIK3IP1Q96FE7 263 aa16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 LDAHQ9H6V9 325 aa16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 ATPIF1Q9UII2 106 aa16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 NUP50Q9UKX7 468 aa16.08■□□□□ 0.16
PDLIM4-201ENST00000253754 PQLC2LA1A4F0 135 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 C3orf80F5H4A9 247 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 NUP62P37198 522 aaPredicted RBP16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 RBMXP38159 391 aaKnown RBP16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 PMP22Q01453 160 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 MALLQ13021 153 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 SNTB1Q13884 538 aaKnown RBP16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 RBM39Q14498 530 aaKnown RBP16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 SP6Q3SY56 376 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 STPG2Q8N412 459 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 BOLLQ8N9W6 283 aaKnown RBP16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 MRPS24Q96EL2 167 aaKnown RBP16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 C2orf50Q96LR7 162 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 ZNF442Q9H7R0 627 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 SESN1Q9Y6P5 492 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 CRYM-AS1A6NIL9 109 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 GLI4P10075 376 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 PIGPP57054 158 aa16.07■□□□□ 0.16
PDLIM4-201ENST00000253754 PRSS54Q6PEW0 395 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms