RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Akip1Q9JJR5 212 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ackr1Q9QUI6 334 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 A0A286YDG0 184 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Mtg2A2AFK4 405 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Chd7A2AJK6 2986 aaKnown RBP11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 1700015F17RikD3YUK8 150 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm10376D3YXI8 184 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Fam98cE9PYD1 344 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm5798F7BTS7 198 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm10375L7N286 184 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Bet1O35623 118 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 DxoO70348 397 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 P01637 128 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Htr2aP35363 471 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 FauP35545 74 aaKnown RBP11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 FblP35550 327 aaKnown RBP11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Dok1P97465 482 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Timm8a2Q4FZG7 97 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Glra1Q64018 457 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 CblcQ80XL1 496 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Neurl3Q8CJC5 254 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Alg12Q8VDB2 486 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Calhm2Q8VEC4 323 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1279Q8VF38 313 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr522Q8VGL1 312 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Cela1Q91X79 266 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ackr4Q924I3 350 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Q9CWB7 115 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 TsfmQ9CZR8 324 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Iqcf5Q9DAL7 148 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 1700001F09RikQ9DAR5 184 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Cited4Q9WUL8 182 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 TpbgQ9Z0L0 426 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Angptl4Q9Z1P8 410 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm12117V9GXK0 151 aa11.92□□□□□ -0.5
Nup88-201ENSMUST00000035283 Atg2bQ80XK6 2075 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr199F6ZUS0 308 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Vmn2r66K7N6R9 851 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Cyp1a2P00186 513 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 P04945 108 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 PrkacaP05132 351 aaKnown RBP11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Csf1P07141 552 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Hoxb5P09079 269 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gabrg2P22723 474 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Lefty2P57785 368 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tnrc6aQ3UHK8 1896 aaKnown RBP11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Repin1Q5U4E2 545 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Slc17a1Q61983 465 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ceacam14Q78Y72 263 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Vmn1r211Q8R266 298 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr922Q8VG50 311 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Hyal1Q91ZJ9 462 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Med6Q921D4 246 aaKnown RBP11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tmem33Q9CR67 247 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 1700029F12RikQ9CRB4 147 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tmem50bQ9D1X9 158 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 S100a16Q9D708 124 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 CutcQ9D8X1 272 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 FcrlsQ9EQY5 509 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 BlnkQ9QUN3 457 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Mmp16Q9WTR0 607 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 TinagQ9WUR0 475 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ca14Q9WVT6 337 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr432E9Q8M2 312 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm21721J3QMK7 227 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gpr33O88416 339 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 CapzbP47757 277 aaKnown RBP11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tango2P54797 276 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Cpne2P59108 548 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Hes3Q61657 175 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Sdhaf2Q8C6I2 164 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 2210010C04RikQ9CPN9 247 aaKnown RBP11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Pnrc2Q9CR73 140 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 OcstampQ9D611 498 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Il36bQ9D6Z6 183 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Nprl2Q9WUE4 380 aa11.91□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm4858A0A0A6YWS7 318 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr267A2AM35 313 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Esp16A8R0U9 85 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Tmem200bD3Z0P8 284 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Gm21976J3QNN2 249 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ccdc69Q3TCJ8 202 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Znf768Q8R0T2 568 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Vmn1r231Q8R2A3 311 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Cuedc1Q8R3V6 388 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Naa40Q8VE10 237 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr1038Q8VGS1 319 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Olfr283Q8VGU2 309 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ddit4lQ8VHZ5 193 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Abhd17aQ99JW1 310 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Znf319Q9ERR8 581 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Ndrg2Q9QYG0 371 aaKnown RBP11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 ClnkQ9QZE2 435 aa11.9□□□□□ -0.5
Nup88-201ENSMUST00000035283 Rai1Q61818 1889 aa11.9□□□□□ -0.51
Nup88-201ENSMUST00000035283 Olfr1438-ps1A0A140LHS9 319 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 A0A286YCH8 300 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 3110040M04RikA0A286YDK0 300 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 A0A286YE43 300 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 EhfO70273 300 aa11.89□□□□□ -0.51
Nup88-201ENSMUST00000035283 Srp9P49962 86 aa11.89□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 46.1 ms