RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 HIST1H1CP16403 213 aaKnown RBP10.91□□□□□ -0.66
SNX1-214ENST00000625244 ZNF3P17036 446 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 ESRRGP62508 458 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 SLC35F1Q5T1Q4 408 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 FAHD1Q6P587 224 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 KCTD8Q6ZWB6 473 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 CALHM1Q8IU99 346 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 OR4Q3Q8NH05 313 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 OR4K13Q8NH42 304 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 OR5P3Q8WZ94 311 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 EME1Q96AY2 570 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 REEP6Q96HR9 211 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 NMNAT3Q96T66 252 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 C9orf16Q9BUW7 83 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 LINC00527Q9UJ94 153 aa10.91□□□□□ -0.66
SNX1-214ENST00000625244 RFPL4AA6NLU0 287 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 ANXA2P2A6NMY6 339 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 RFPL4AL1F8VTS6 287 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 LDLRAD4O15165 306 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 TBX1O43435 398 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 MTRF1O75570 445 aaKnown RBP10.9□□□□□ -0.66
SNX1-214ENST00000625244 HMGN1P05114 100 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 ZNF823P16415 610 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 GSK3AP49840 483 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.9□□□□□ -0.66
SNX1-214ENST00000625244 RCN1Q15293 331 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 LCNL1Q6ZST4 164 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 ZBTB46Q86UZ6 589 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 OR8D4Q8NGM9 314 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 CIB1Q99828 191 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 COPS4Q9BT78 406 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 DCLRE1BQ9H816 532 aa10.9□□□□□ -0.66
SNX1-214ENST00000625244 RPRD1BQ9NQG5 326 aaKnown RBP10.9□□□□□ -0.66
SNX1-214ENST00000625244 TRIM64CA6NLI5 447 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 ZNF850A8MQ14 1090 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 ZNF728P0DKX0 622 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 DAPP51397 102 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 CRISP1P54107 249 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 ACTA2P62736 377 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 ACTG2P63267 376 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 ACTC1P68032 377 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 ACTA1P68133 377 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 PRDX4Q13162 271 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 GINS1Q14691 196 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 TIGD6Q17RP2 521 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 KDM4DQ6B0I6 523 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 OR2T4Q8NH00 348 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 OR8U1Q8NH10 309 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 CHPT1Q8WUD6 406 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 HPSE2Q8WWQ2 592 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 OTULINQ96BN8 352 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 RNF170Q96K19 258 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 KCNJ15Q99712 375 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 FN3KQ9H479 309 aa10.89□□□□□ -0.67
SNX1-214ENST00000625244 PRR23D1E9PI22 279 aaPredicted RBP10.88□□□□□ -0.67
SNX1-214ENST00000625244 EI24O14681 340 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 PRR23D2P0DMB1 279 aaPredicted RBP10.88□□□□□ -0.67
SNX1-214ENST00000625244 PRDX2P32119 198 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 ALDH3A2P51648 485 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 IL18R1Q13478 541 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 KIR2DS1Q14954 304 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 ZBTB49Q6ZSB9 765 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 ZNF561Q8N587 486 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 IQCF1Q8N6M8 205 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 CSNK2A3Q8NEV1 391 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 PROKR2Q8NFJ6 384 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 GATAD1Q8WUU5 269 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 LINC00476Q8WZB0 136 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 RNFT2Q96EX2 444 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 RIBC2Q9H4K1 309 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 SLC25A19Q9HC21 320 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 C8orf4Q9NR00 106 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 CMC2Q9NRP2 79 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 MPC1Q9Y5U8 109 aa10.88□□□□□ -0.67
SNX1-214ENST00000625244 IGHV2-26A0A0B4J1V2 119 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 SLC1A7O00341 560 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 RBP4P02753 201 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 RPLP1P05386 114 aaKnown RBP10.87□□□□□ -0.67
SNX1-214ENST00000625244 ANXA2P07355 339 aaKnown RBP10.87□□□□□ -0.67
SNX1-214ENST00000625244 HTR1DP28221 377 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 BRS3P32247 399 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 GPM6AP51674 278 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 BLVRAP53004 296 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 CRMP1Q14194 572 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 PTGES3Q15185 160 aaKnown RBP10.87□□□□□ -0.67
SNX1-214ENST00000625244 TAF13Q15543 124 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 SNAPC1Q16533 368 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 GFOD2Q3B7J2 385 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 FAM27D1Q5T7N8 215 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 ACP7Q6ZNF0 438 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 DCXRQ7Z4W1 244 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 CBR4Q8N4T8 237 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 SLC37A3Q8NCC5 494 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 OR4P4Q8NGL7 312 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 VCXQ9H320 206 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 CENPMQ9NSP4 180 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 ZNF319Q9P2F9 582 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 KCNG2Q9UJ96 466 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 HHLA2Q9UM44 414 aa10.87□□□□□ -0.67
SNX1-214ENST00000625244 OR6C68A6NDL8 312 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms