RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 FANCFQ9NPI8 374 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 TXNL4BQ9NX01 149 aaKnown RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 QPCTLQ9NXS2 382 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 TAS2R5Q9NYW4 299 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 MRPS18BQ9Y676 258 aaKnown RBP3.98□□□□□ -1.77
VPS29-212ENST00000621131 HIVEP1P15822 2718 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 NBEAL1Q6ZS30 2694 aa3.98□□□□□ -1.77
VPS29-212ENST00000621131 SDK2Q58EX2 2172 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 A0A075B6Q4 140 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 LOC102725191A0A1B0GVB3 256 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 IQCMA0A1B0GVH7 501 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 A0A1W2PNU3 283 aaPredicted RBP3.97□□□□□ -1.77
VPS29-212ENST00000621131 OR5H15A6NDH6 313 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 TVP23AA6NH52 213 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 ARGFXA6NJG6 315 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 TMEM212A6NML5 194 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 C17orf51A8MQB3 221 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 J3QRE1 110 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 ZNF593O00488 134 aaPredicted RBP3.97□□□□□ -1.77
VPS29-212ENST00000621131 GABRPO00591 440 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 GPR171O14626 319 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 SLC19A2O60779 497 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 ZNF254O75437 659 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 GPX5O75715 221 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 AQP8O94778 261 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 CDRT1O95170 752 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 H2BFMP0C1H6 154 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 DNAH10OSP0CZ25 163 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 CD40LGP29965 261 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 TALDO1P37837 337 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 CRYBB2P43320 205 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 CSNK1A1P48729 337 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 GDI2P50395 445 aaKnown RBP3.97□□□□□ -1.77
VPS29-212ENST00000621131 RIDAP52758 137 aaKnown RBP3.97□□□□□ -1.77
VPS29-212ENST00000621131 CLDN17P56750 224 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 CARD18P57730 90 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 OR12D2P58182 307 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 DEFA1P59665 94 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 DEFA3P59666 94 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 MXD1Q05195 221 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 SLC3A1Q07837 685 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 CDK5R1Q15078 307 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 MS4A18Q3C1V0 323 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 YIF1BQ5BJH7 314 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 DDI2Q5TDH0 399 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 SLC25A25Q6KCM7 469 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 B3GLCTQ6Y288 498 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 LINC00696Q6ZRV3 163 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 ZNF676Q8N7Q3 588 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 ZFP41Q8N8Y5 198 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 POC5Q8NA72 575 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 MINDY2Q8NBR6 621 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 FAM83FQ8NEG4 500 aaPredicted RBP3.97□□□□□ -1.77
VPS29-212ENST00000621131 OR2M7Q8NG81 312 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 OR6Q1Q8NGQ2 317 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 OR6X1Q8NH79 312 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 OR5AK2Q8NH90 309 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 OR2V1Q8NHB1 315 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 OTOSQ8NHW6 89 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 NEIL3Q8TAT5 605 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 TSEN15Q8WW01 171 aaKnown RBP3.97□□□□□ -1.77
VPS29-212ENST00000621131 SMIM19Q96E16 107 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 ARL5BQ96KC2 179 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 MS4A10Q96PG2 267 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 NKX3-1Q99801 234 aaPredicted RBP3.97□□□□□ -1.77
VPS29-212ENST00000621131 SH3GL3Q99963 347 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 CENPOQ9BU64 300 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 PRRG4Q9BZD6 226 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 MARCH7Q9H992 704 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 EMC3Q9P0I2 261 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 CKLFQ9UBR5 152 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 IL17BQ9UHF5 180 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 MCTS1Q9ULC4 181 aaKnown RBP3.97□□□□□ -1.77
VPS29-212ENST00000621131 B9D1Q9UPM9 204 aa3.97□□□□□ -1.77
VPS29-212ENST00000621131 CPAMD8Q8IZJ3 1885 aa3.96□□□□□ -1.77
VPS29-212ENST00000621131 PTPRBP23467 1997 aa3.96□□□□□ -1.77
VPS29-212ENST00000621131 ICE1Q9Y2F5 2266 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 IGLV1-36A0A0B4J1U3 117 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 OR6C65A6NJZ3 312 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 FAM166BA8MTA8 275 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 A8MU10 97 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 FAM25AB3EWG3 89 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 FAM25CB3EWG5 89 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 FAM25GB3EWG6 89 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 TNFSF11O14788 317 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 BCL2L11O43521 198 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 NME2P1O60361 137 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 KRT33AO76009 404 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 RPP14O95059 124 aaKnown RBP3.96□□□□□ -1.78
VPS29-212ENST00000621131 ACTL6AO96019 429 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 APOA1P02647 267 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 APOC1P02654 83 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 OPN1LWP04000 364 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 HPNP05981 417 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 CD2P06729 351 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 KRTAP1-4P0C5Y4 121 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 DANCRP0C864 163 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 OR8G3PP0DMU2 310 aa3.96□□□□□ -1.78
VPS29-212ENST00000621131 PRKAR1AP10644 381 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms