RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 PAX6P26367 422 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 CBX1P83916 185 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 COL10A1Q03692 680 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 NSUN5P1Q3KNT7 163 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 DMRTC1Q5HYR2 192 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 ZNF782Q6ZMW2 699 aaPredicted RBP14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 SLC35F2Q8IXU6 374 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 OR8H2Q8N162 312 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 SGCDQ92629 289 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 CEP19Q96LK0 163 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 ZNF714Q96N38 554 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 ENOPH1Q9UHY7 261 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 GLS2Q9UI32 602 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 COPS3Q9UNS2 423 aa14.37□□□□□ -0.11
SHKBP1-227ENST00000602011 F2RL2O00254 374 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 FKBP6O75344 327 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 KRT8P05787 483 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 CD28P10747 220 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 PEX2P28328 305 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 EDDM3BP56851 147 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 MFGE8Q08431 387 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 ARSJQ5FYB0 599 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 FAHD1Q6P587 224 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 CCBE1Q6UXH8 406 aaPredicted RBP14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 SPATA24Q86W54 205 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 GID4Q8IVV7 300 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 HS3ST5Q8IZT8 346 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 MRAPQ8TCY5 172 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 APOL4Q9BPW4 351 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 ADI1Q9BV57 179 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 PLEKHA1Q9HB21 404 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 LINC00312Q9Y6C7 94 aa14.36□□□□□ -0.11
SHKBP1-227ENST00000602011 FAM90A22PA8MWA6 464 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 PIPP12273 146 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 CEBPDP49716 269 aaPredicted RBP14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 RAB13P51153 203 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 ARHGDIBP52566 201 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 EFNB1P98172 346 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 DYNC1I2Q13409 638 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 FLOT2Q14254 428 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 DNAL1Q4LDG9 190 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 OXLD1Q5BKU9 147 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 AADACL4Q5VUY2 407 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 OR52W1Q6IF63 320 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 ANGPTL5Q86XS5 388 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 EGFL6Q8IUX8 553 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 BCAS4Q8TDM0 211 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 MMP28Q9H239 520 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 SESN1Q9Y6P5 492 aa14.35□□□□□ -0.11
SHKBP1-227ENST00000602011 FAM230AA0A1W2PPH8 454 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 TCRBV3S1A0A5B6 114 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 FUOMA2VDF0 154 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 PRR32B1ATL7 298 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 SYT7O43581 403 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 PRKYO43930 277 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 SULT1C4O75897 302 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 CYB5AP00167 134 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 OR2T7P0C7T2 308 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 ERP29P30040 261 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 BRS3P32247 399 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 VDAC2P45880 294 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 ACTA2P62736 377 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 ACTG2P63267 376 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 ACTC1P68032 377 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 ACTA1P68133 377 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 RTN4RL2Q86UN3 420 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 DYNAPQ8N1N2 210 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 DNAAF1Q8NEP3 725 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 TMEM163Q8TC26 289 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 CAPSLQ8WWF8 208 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 CREB3L1Q96BA8 519 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 CITED2Q99967 270 aaPredicted RBP14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 ADGRL4Q9HBW9 690 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 MTCH1Q9NZJ7 389 aa14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 WARS2Q9UGM6 360 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 MRM2Q9UI43 246 aaKnown RBP14.34□□□□□ -0.11
SHKBP1-227ENST00000602011 GYG2O15488 501 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 DUS4LO95620 317 aaKnown RBP14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 HTR1DP28221 377 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 CDC42P60953 191 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 CD83Q01151 205 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 SLC34A1Q06495 639 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 TMED1Q13445 227 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 ZNF676Q8N7Q3 588 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 PP6455Q8WZ26 134 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 BORCS8Q96FH0 119 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 CLEC7AQ9BXN2 247 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 TMEM133Q9H2Q1 129 aa14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 UBE2J1Q9Y385 318 aaPredicted RBP14.33□□□□□ -0.12
SHKBP1-227ENST00000602011 METTL15A6NJ78 407 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 MGST3O14880 152 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 CD33P20138 364 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 DAPP51397 102 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 ATP1B3P54709 279 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 BLCAPP62952 87 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 HABP2Q14520 560 aaPredicted RBP14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 PLA1AQ53H76 456 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 SPIN3Q5JUX0 258 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 CATSPERDQ86XM0 798 aa14.32□□□□□ -0.12
SHKBP1-227ENST00000602011 TMEM219Q86XT9 240 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms