RNA–Protein interactions for RNA: ENST00000597649.5

SHKBP1-215, Transcript of SH3KBP1 binding protein 1, human

TSL 5

Gene SHKBP1, Length 781 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SHKBP1-215	ENST00000597649	ELMOD2	Q8IZ81	293 aa		13.43	□□□□□ -0.26
SHKBP1-215	ENST00000597649	NANOGP1	Q8N7R0	232 aa		13.43	□□□□□ -0.26
SHKBP1-215	ENST00000597649	SPERT	Q8NA61	448 aa		13.43	□□□□□ -0.26
SHKBP1-215	ENST00000597649	OR56B2P	Q8NGI1	322 aa		13.43	□□□□□ -0.26
SHKBP1-215	ENST00000597649	OR2G2	Q8NGZ5	317 aa		13.43	□□□□□ -0.26
SHKBP1-215	ENST00000597649	LRRC29	Q8WV35	223 aa		13.43	□□□□□ -0.26
SHKBP1-215	ENST00000597649	PPP1R14A	Q96A00	147 aa		13.43	□□□□□ -0.26
SHKBP1-215	ENST00000597649	ZNF319	Q9P2F9	582 aa		13.43	□□□□□ -0.26
SHKBP1-215	ENST00000597649	SLC22A13	Q9Y226	551 aa		13.43	□□□□□ -0.26
SHKBP1-215	ENST00000597649		A0A0U1RQV5	110 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	MEIOC	A2RUB1	952 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	TTR	P02766	147 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	MUC1	P15941	1255 aa	Predicted RBP	13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	SAA4	P35542	130 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	TGM4	P49221	684 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	IKZF1	Q13422	519 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	MICB	Q29980	383 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	CCDC58	Q4VC31	144 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	FDX2	Q6P4F2	183 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	RPL22L1	Q6P5R6	122 aa	Known RBP	13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	REC114	Q7Z4M0	266 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	SVOP	Q8N4V2	548 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	OR5R1	Q8NH85	324 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	OR51E1	Q8TCB6	317 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	MRAP	Q8TCY5	172 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	SPSB4	Q96A44	273 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	AJUBA	Q96IF1	538 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	DMRTB1	Q96MA1	342 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	DCTN5	Q9BTE1	182 aa		13.42	□□□□□ -0.26
SHKBP1-215	ENST00000597649	TRBV2	A0A0J9YWF9	115 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649		E9PI62	339 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	MTRF1	O75570	445 aa	Known RBP	13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	TNFAIP8	O95379	198 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	TFF1	P04155	84 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	KIR2DS4	P43632	304 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	CCR9	P51686	369 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	TAS2R43	P59537	309 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	GUCA2A	Q02747	115 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	IRF3	Q14653	427 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	MED22	Q15528	200 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	KCTD21	Q4G0X4	260 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	TMEM244	Q5VVB8	128 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	WDR82	Q6UXN9	313 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	LYG1	Q8N1E2	194 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	PRSS35	Q8N3Z0	413 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	KLHDC1	Q8N7A1	406 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	ZNF676	Q8N7Q3	588 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	OR5T2	Q8NGG2	359 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	C8orf46	Q8TAG6	207 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	COMMD4	Q9H0A8	199 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	GPR84	Q9NQS5	396 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	C14orf119	Q9NWQ9	140 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649	FRRS1L	Q9P0K9	344 aa		13.41	□□□□□ -0.26
SHKBP1-215	ENST00000597649		H3BUX3	64 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	SYT7	O43581	403 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	PAH	P00439	452 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	RPSA	P08865	295 aa	Known RBP	13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	UBC	P0CG48	685 aa	Known RBP	13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	PAX6	P26367	422 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	DDOST	P39656	456 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	KIR3DL2	P43630	455 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	MAP2K4	P45985	399 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	MAP2K3	P46734	347 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	GSK3A	P49840	483 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	UBE2E1	P51965	193 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	GTF2A1	P52655	376 aa	Predicted RBP	13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	LOXL3	P58215	753 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	FAM3A	P98173	230 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	SPHAR	Q15513	63 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	LY6E	Q16553	131 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	HCP5	Q6MZN7	132 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	CRIP3	Q6Q6R5	217 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	CMTM4	Q8IZR5	234 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	BEND2	Q8NDZ0	799 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	OR1M1	Q8NGA1	313 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	OR5AK2	Q8NH90	309 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	LYZL4	Q96KX0	146 aa		13.4	□□□□□ -0.26
SHKBP1-215	ENST00000597649	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	hCG_38984	A0A1B0GV85	526 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	TMEM212	A6NML5	194 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	ANKRD30BL	A7E2S9	258 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	NDUFB3	O43676	98 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	HSMCR30	P0CW71	290 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	ATP6V1B1	P15313	513 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	NANOS3	P60323	173 aa	Known RBP	13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	MZT1	Q08AG7	82 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	STUM	Q69YW2	141 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	ZNF773	Q6PK81	442 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	SLC36A1	Q7Z2H8	476 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	FTMT	Q8N4E7	242 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	CCDC54	Q8NEL0	328 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	CSNK2A3	Q8NEV1	391 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	OR8S1	Q8NH09	359 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	ITFG2	Q969R8	447 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	RNF166	Q96A37	237 aa	Predicted RBP	13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	NR1H4	Q96RI1	486 aa	Predicted RBP	13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	SSX3	Q99909	188 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	WDR13	Q9H1Z4	485 aa		13.39	□□□□□ -0.27
SHKBP1-215	ENST00000597649	AURKAIP1	Q9NWT8	199 aa	Predicted RBP	13.39	□□□□□ -0.27

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